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Segmentation fault on empty files #37

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blaiseli opened this issue Dec 20, 2019 · 0 comments · May be fixed by #42

blaiseli commented Dec 20, 2019

bioawk segfaults when asked to parse an empty files

$ touch test.fastq
$ gzip test.fastq 
$ bioawk -c fastx '{print}' test.fastq.gz 
Segmentation fault

Actually, it also segfaults on non-gzipped input:

$ touch test.fastq
$ bioawk -c fastx '{print}' test.fastq
Segmentation fault

Is it something easily fixable?

The text was updated successfully, but these errors were encountered:

elmccarthy linked a pull request

that will close this issue

Avoid segfault on empty fastx file #42

Open

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