From 85d453e86afebe9d78df4ab7dd0d04f1a6d333d6 Mon Sep 17 00:00:00 2001 From: Andre Faure <39261277+andrefaure@users.noreply.github.com> Date: Wed, 14 Aug 2024 15:07:39 +0200 Subject: [PATCH] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 3216288..ee4cfa1 100644 --- a/README.md +++ b/README.md @@ -40,7 +40,7 @@ MoCHI requires a plain text model design file containing a table describing the - `trait`: One or more additive trait names - `transformation`: The shape of the global epistatic trend (Linear/ReLU/SiLU/Sigmoid/SumOfSigmoids/TwoStateFractionFolded/ThreeStateFractionBound) - `phenotype`: A unique phenotype name e.g. Abundance, Binding or Kinase Activity - - `file`: Path to DiMSum output (.RData) or plain text file with variant fitness and error estimates for the corresponding phenotype + - `file`: Path to DiMSum output (.RData) or plain text file with variant fitness and error estimates for the corresponding phenotype(s) (nucleotide sequence example [here](https://github.com/lehner-lab/MoCHI/blob/master/pymochi/data/fitness_example_nt.txt), amino acid sequence example [here](https://github.com/lehner-lab/MoCHI/blob/master/pymochi/data/fitness_example_aa.txt)) ## Option A: MoCHI command line tool