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Tomography images not storing pixeltype and pixelsize #11098

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leginonbot opened this issue Mar 19, 2024 · 0 comments
Open

Tomography images not storing pixeltype and pixelsize #11098

leginonbot opened this issue Mar 19, 2024 · 0 comments
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Component: Affected Version Component: Show in known bugs Component: Workaround Priority: Normal Project: Leginon Status: New Tracker: Bug

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Author Name: Clint Potter (Clint Potter)
Original Redmine Issue: 11098, https://emg.nysbc.org/redmine/issues/11098
Original Date: 2021-09-26

Tomography images are not storing 'pixeltype' and 'pixels' values in the AcquisitionImageData table. These are NaN when queried. Examples are:

"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_031"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_032"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_033"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_034"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_035"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_036"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_037"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_038"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_039"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_040"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_041"
"21sep23a_yeast_sf2z_00010gr_00001sq_v02_00002hln_v02_00002tomo_042"
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Component: Affected Version Component: Show in known bugs Component: Workaround Priority: Normal Project: Leginon Status: New Tracker: Bug
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