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modules.json
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modules.json
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{
"name": "nf-core/ampliseq",
"homePage": "https://github.com/nf-core/ampliseq",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"cutadapt": {
"branch": "master",
"git_sha": "6618151ed69274863dc6fe6d2920afa90abaca1f",
"installed_by": ["modules"]
},
"epang/place": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["fasta_newick_epang_gappa"]
},
"epang/split": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["fasta_newick_epang_gappa"]
},
"fastqc": {
"branch": "master",
"git_sha": "285a50500f9e02578d90b3ce6382ea3c30216acd",
"installed_by": ["modules"]
},
"gappa/examineassign": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["fasta_newick_epang_gappa"]
},
"gappa/examinegraft": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["fasta_newick_epang_gappa"]
},
"gappa/examineheattree": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["fasta_newick_epang_gappa"]
},
"hmmer/eslalimask": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["fasta_newick_epang_gappa"]
},
"hmmer/eslreformat": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["fasta_newick_epang_gappa"]
},
"hmmer/hmmalign": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["fasta_newick_epang_gappa"]
},
"hmmer/hmmbuild": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["fasta_newick_epang_gappa"]
},
"kraken2/kraken2": {
"branch": "master",
"git_sha": "653218e79ffa76fde20319e9062f8b8da5cf7555",
"installed_by": ["modules"],
"patch": "modules/nf-core/kraken2/kraken2/kraken2-kraken2.diff"
},
"mafft": {
"branch": "master",
"git_sha": "feb29be775d9e41750180539e9a3bdce801d0609",
"installed_by": ["fasta_newick_epang_gappa"]
},
"multiqc": {
"branch": "master",
"git_sha": "b7ebe95761cd389603f9cc0e0dc384c0f663815a",
"installed_by": ["modules"]
},
"pigz/uncompress": {
"branch": "master",
"git_sha": "4ef7becf6a2bbc8df466885d10b4051d1f318a6a",
"installed_by": ["modules"],
"patch": "modules/nf-core/pigz/uncompress/pigz-uncompress.diff"
},
"untar": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["modules"]
},
"vsearch/cluster": {
"branch": "master",
"git_sha": "d97b335eb448073c1b680710303c02a55f40c77c",
"installed_by": ["modules"]
},
"vsearch/sintax": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
},
"vsearch/usearchglobal": {
"branch": "master",
"git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
"installed_by": ["modules"]
}
}
},
"subworkflows": {
"nf-core": {
"fasta_newick_epang_gappa": {
"branch": "master",
"git_sha": "cfd937a668919d948f6fcbf4218e79de50c2f36f",
"installed_by": ["subworkflows"]
},
"utils_nextflow_pipeline": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["subworkflows"]
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "92de218a329bfc9a9033116eb5f65fd270e72ba3",
"installed_by": ["subworkflows"]
},
"utils_nfvalidation_plugin": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["subworkflows"]
}
}
}
}
}
}