📝 Edit search queries for public ontologies (#173)

scripts/entity_generation/generate.py

@@ -82,10 +82,10 @@
     "example_dict_value": "CD8-positive, alpha-beta T cell",
     "alternative_field_value": "cl_0000625",
     "alternative_field": "ontology_id",
-    "search_value": "CD8 positive T cell",
+    "search_value": "Tc1 cell",
     "search_synonyms_value": "Tc1 T lymphocyte",
     "search_field": "definition",
-    "search_query": "CD8 positive alpha beta T cell",
+    "search_query": "cd8-positive, alpha-beta positive t cell",
     "identifiers": "Boettcher cell,bone marrow cell,interstitial cell of ovary,pancreatic ductal cell",
     "database": "cl",
     "version": "2023-04-20",
@@ -100,10 +100,10 @@
     "example_dict_value": "alveolus of lung",
     "alternative_field_value": "uberon_0000031",
     "alternative_field": "ontology_id",
-    "search_value": "alveolus lung",
+    "search_value": "lung alveolus",
     "search_synonyms_value": "nasal sac",
     "search_field": "definition",
-    "search_query": "alveolus in the lung",
+    "search_query": "spherical outcropping of the respiratory",
     "identifiers": "UBERON:0000000,UBERON:0000005,UBERON:0000001,UBERON:0000002",
     "database": "uberon",
     "version": "2023-04-19",
@@ -119,7 +119,7 @@
     "example_dict_value": "Alzheimer disease",
     "alternative_field_value": "mondo_0004975",
     "alternative_field": "ontology_id",
-    "search_value": "parkinsons disease",
+    "search_value": "parkinson disease",
     "search_synonyms_value": "paralysis agitans",
     "search_field": "definition",
     "search_query": "progressive degenerative disorder of the central nervous system",
@@ -155,7 +155,7 @@
     "example_dict_value": "acetyl-CoA assimilation pathway",
     "alternative_field_value": "go_0019681",
     "alternative_field": "ontology_id",
-    "search_value": "acetyl coa assimilation",
+    "search_value": "acetyl-coa assimilation",
     "search_synonyms_value": "acetyl-CoA catabolism",
     "search_field": "definition",
     "search_query": "Chemical reactions and pathways resulting in the breakdown of Cinnamic Acid,3-Phenyl-2-Propenoic Acid.",
@@ -176,7 +176,7 @@
     "search_value": "single-cell rna seq",
     "search_synonyms_value": "single-cell RNA-seq",
     "search_field": "definition",
-    "search_query": "assay which analysis the transcriptome of a biological sample",
+    "search_query": "protocol that provides the expression profiles of single cells",
     "identifiers": "EFO:0011021,EFO:1002050,EFO:1002047,EFO:1002049",
     "database": "efo",
     "version": "3.48.0",
@@ -212,7 +212,7 @@
     "search_value": "American",
     "search_synonyms_value": "Caucasian",
     "search_field": "definition",
-    "search_query": "General characterisation of Ancestry of a population",
+    "search_query": "General characterisation of the Ancestry of a population",
     "identifiers": "Mende,European,South Asian,Arab",
     "database": "hancestro",
     "version": "3.0",