release #28
Annotations
1 error and 6 warnings
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Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, webfactory/[email protected], actions/setup-node@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, webfactory/[email protected], actions/setup-node@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Pip subprocess error:
WARNING: The candidate selected for download or install is a yanked version: 'opencv-python' candidate (version 4.7.0.68 at https://files.pythonhosted.org/packages/be/12/6369d2b15422d4074d7aaf5332dcb0d590f8779020ba7135526ca6f49632/opencv_python-4.7.0.68-cp37-abi3-macosx_11_0_arm64.whl (from https://pypi.org/simple/opencv-python/) (requires-python:>=3.6))
Reason for being yanked: Deprecated, use 4.7.0.71
error: subprocess-exited-with-error
× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [474 lines of output]
/Users/runner/miniconda3/envs/minerva_analysis/lib/python3.9/site-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
running bdist_wheel
running build
running build_py
creating build
creating build/lib.macosx-11.0-arm64-cpython-39
creating build/lib.macosx-11.0-arm64-cpython-39/imagecodecs
copying imagecodecs/numcodecs.py -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs
copying imagecodecs/__init__.py -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs
copying imagecodecs/_imagecodecs.py -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs
copying imagecodecs/imagecodecs.py -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs
copying imagecodecs/__main__.py -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs
creating build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-zfp -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-fastlz -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-postgresql -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-libjpeg -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-liblzma -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-libmng -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-jpg_0xc3 -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-bzip2 -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-libtiff -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-zlib -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-openjpeg -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-libjpeg-turbo -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-libaivf -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-aom -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-snappy -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-lerc -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-lz4 -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-brunsli -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copying imagecodecs/licenses/LICENSE-dav1d -> build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/licenses
copy
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^~~~~~~~~~~~~~~~~~~
/Applications/Xcode_15.0.1.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/15.0.0/include/arm_neon.h:26857:26: note: expanded from macro 'vst1q_s8'
__builtin_neon_vst1q_v(__p0, (int8x16_t)__s1, 32); \
^~~~
3rdparty/bitshuffle/bitshuffle_core.c:683:27: warning: assigning to 'const signed char *' from 'const char *' converts between pointers to integer types where one is of the unique plain 'char' type and the other is not [-Wpointer-sign]
a0 = vld1q_s8(in_b + (ii + 0)*nbyte_row + jj);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Applications/Xcode_15.0.1.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/15.0.0/include/arm_neon.h:8801:46: note: expanded from macro 'vld1q_s8'
__ret = (int8x16_t) __builtin_neon_vld1q_v(__p0, 32); \
^~~~
3rdparty/bitshuffle/bitshuffle_core.c:684:27: warning: assigning to 'const signed char *' from 'const char *' converts between pointers to integer types where one is of the unique plain 'char' type and the other is not [-Wpointer-sign]
b0 = vld1q_s8(in_b + (ii + 1)*nbyte_row + jj);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Applications/Xcode_15.0.1.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/15.0.0/include/arm_neon.h:8801:46: note: expanded from macro 'vld1q_s8'
__ret = (int8x16_t) __builtin_neon_vld1q_v(__p0, 32); \
^~~~
3rdparty/bitshuffle/bitshuffle_core.c:685:27: warning: assigning to 'const signed char *' from 'const char *' converts between pointers to integer types where one is of the unique plain 'char' type and the other is not [-Wpointer-sign]
c0 = vld1q_s8(in_b + (ii + 2)*nbyte_row + jj);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Applications/Xcode_15.0.1.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/15.0.0/include/arm_neon.h:8801:46: note: expanded from macro 'vld1q_s8'
__ret = (int8x16_t) __builtin_neon_vld1q_v(__p0, 32); \
^~~~
3rdparty/bitshuffle/bitshuffle_core.c:686:27: warning: assigning to 'const signed char *' from 'const char *' converts between pointers to integer types where one is of the unique plain 'char' type and the other is not [-Wpointer-sign]
d0 = vld1q_s8(in_b + (ii + 3)*nbyte_row + jj);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Applications/Xcode_15.0.1.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/15.0.0/include/arm_neon.h:8801:46: note: expanded from macro 'vld1q_s8'
__ret = (int8x16_t) __builtin_neon_vld1q_v(__p0, 32); \
^~~~
3rdparty/bitshuffle/bitshuffle_core.c:687:27: warning: assigning to 'const signed char *' from 'const char *' converts between pointers to integer types where one is of the unique plain 'char' type and the other is not [-Wpointer-sign]
e0 = vld1q_s8(in_b + (ii + 4)*nbyte_row + jj);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Applications/Xcode_15.0.1.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/15.0.0/include/arm_neon.h:8801:46: note: expanded from macro 'vld1q_s8'
__ret = (int8x16_t) __builtin_neon_vld1q_v(__p0, 32); \
^~~~
3rdparty/bitshuffle/bitshuffle_core.c:688:27: warning: assigning to 'const signed char *' from 'const char *' converts between pointers to integer types where one is of the unique plain 'char' type and the other is not [-Wpointer-sign]
f0 = vld1q_s8(in_b + (ii + 5)*nbyte_row + jj);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Applications/Xcode_15.0.1.app/Contents/Developer/Toolchains/XcodeDefault.xct
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CYTHON_FALLTHROUGH;
^
imagecodecs/_bitshuffle.c:276:34: note: expanded from macro 'CYTHON_FALLTHROUGH'
#define CYTHON_FALLTHROUGH __attribute__((fallthrough))
^
3 warnings generated.
clang -bundle -undefined dynamic_lookup -Wl,-rpath,/Users/runner/miniconda3/envs/minerva_analysis/lib -L/Users/runner/miniconda3/envs/minerva_analysis/lib -Wl,-rpath,/Users/runner/miniconda3/envs/minerva_analysis/lib -L/Users/runner/miniconda3/envs/minerva_analysis/lib build/temp.macosx-11.0-arm64-cpython-39/3rdparty/bitshuffle/bitshuffle_core.o build/temp.macosx-11.0-arm64-cpython-39/3rdparty/bitshuffle/iochain.o build/temp.macosx-11.0-arm64-cpython-39/imagecodecs/_bitshuffle.o -lm -o build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/_bitshuffle.cpython-39-darwin.so
ld: warning: duplicate -rpath '/Users/runner/miniconda3/envs/minerva_analysis/lib' ignored
building 'imagecodecs._blosc' extension
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/runner/miniconda3/envs/minerva_analysis/include -arch arm64 -fPIC -O2 -isystem /Users/runner/miniconda3/envs/minerva_analysis/include -arch arm64 -Iimagecodecs -I/Users/runner/miniconda3/envs/minerva_analysis/include/python3.9 -I/Users/runner/miniconda3/envs/minerva_analysis/lib/python3.9/site-packages/numpy/core/include -c imagecodecs/_blosc.c -o build/temp.macosx-11.0-arm64-cpython-39/imagecodecs/_blosc.o
In file included from imagecodecs/_blosc.c:612:
In file included from /Users/runner/miniconda3/envs/minerva_analysis/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5:
In file included from /Users/runner/miniconda3/envs/minerva_analysis/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:
In file included from /Users/runner/miniconda3/envs/minerva_analysis/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929:
/Users/runner/miniconda3/envs/minerva_analysis/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
#warning "Using deprecated NumPy API, disable it with " \
^
imagecodecs/_blosc.c:22052:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough]
CYTHON_FALLTHROUGH;
^
imagecodecs/_blosc.c:276:34: note: expanded from macro 'CYTHON_FALLTHROUGH'
#define CYTHON_FALLTHROUGH __attribute__((fallthrough))
^
imagecodecs/_blosc.c:22063:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough]
CYTHON_FALLTHROUGH;
^
imagecodecs/_blosc.c:276:34: note: expanded from macro 'CYTHON_FALLTHROUGH'
#define CYTHON_FALLTHROUGH __attribute__((fallthrough))
^
3 warnings generated.
clang -bundle -undefined dynamic_lookup -Wl,-rpath,/Users/runner/miniconda3/envs/minerva_analysis/lib -L/Users/runner/miniconda3/envs/minerva_analysis/lib -Wl,-rpath,/Users/runner/miniconda3/envs/minerva_analysis/lib -L/Users/runner/miniconda3/envs/minerva_analysis/lib build/temp.macosx-11.0-arm64-cpython-39/imagecodecs/_blosc.o -lm -lblosc -o build/lib.macosx-11.0-arm64-cpython-39/imagecodecs/_blosc.cpython-39-darwin.so
ld: warning: duplicate -rpath '/Users/runner/miniconda3/envs/minerva_analysis/lib' ignored
building 'imagecodecs._brotli' extension
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/runner/miniconda3/envs/minerva_analysis/include -arch arm64 -fPIC -O2 -isystem /Users/runner/miniconda3/envs/minerva_analysis/include -arch arm64 -Iimagecodecs -I/Users/runner/miniconda3/envs/minerva_analysis/include/python3.9 -I/Use
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