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Create Class for Interval Tree based on Region #37

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dridk opened this issue Mar 10, 2016 · 0 comments
Open

Create Class for Interval Tree based on Region #37

dridk opened this issue Mar 10, 2016 · 0 comments

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@dridk
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dridk commented Mar 10, 2016

We can create a class, which can find region overlapping.
For instance, I have a RegionList containing several Region ( chromosom, start, end ) .
Let's do the methods :
RegionList::overlapping(chromsom, start, end) which returns RegionList overlapping start and end.

Note:
Tabix do the same, but work only of bgzip file. This is not the case here. We only do from memory.

@dridk dridk added the Dev Task label Mar 10, 2016
@dridk dridk added this to the alpha 0.1 - Cuvier milestone Mar 10, 2016
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