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.travis.yml
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.travis.yml
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# Config file for automatic testing at travis-ci.org
# Conda testing for Travis CI from https://gist.github.com/dan-blanchard/7045057
language: python
matrix:
include:
- pyton: 2.7
- python: 3.6
notifications:
email: true
# Setup Anaconda
before_install:
- if [[ "$TRAVIS_PYTHON_VERSION" == "2.7" ]]; then
wget https://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh -O miniconda.sh;
else
wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
fi
- bash miniconda.sh -b -p $HOME/miniconda
- export PATH="$HOME/miniconda/bin:$PATH"
- hash -r
- conda config --set always_yes yes --set changeps1 no
- conda update -q conda
# Useful for debugging any issues with conda
- conda info -a
- conda create -q -n test-environment python=$TRAVIS_PYTHON_VERSION numpy pytest h5py nose
- source activate test-environment
install:
- pip install .
script:
- PYTHONPATH=$PWD:$PYTHONPATH py.test
- bash scripts_test/test_empty_background_script.sh
- bash scripts_test/test_motif_grammar_simulation_script.sh
- bash scripts_test/test_density_motif_simulation_script.sh