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.scaffolding_list.tmp
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org.gmod.schema.analysis.Analysis_ESTest_scaffolding
org.gmod.schema.analysis.AnalysisFeature_ESTest_scaffolding
org.gmod.schema.analysis.AnalysisProp_ESTest_scaffolding
org.gmod.schema.cv.Cv_ESTest_scaffolding
org.gmod.schema.cv.CvTerm_ESTest_scaffolding
org.gmod.schema.cv.CvTermDbXRef_ESTest_scaffolding
org.gmod.schema.cv.CvTermPath_ESTest_scaffolding
org.gmod.schema.cv.CvTermProp_ESTest_scaffolding
org.gmod.schema.cv.CvTermRelationship_ESTest_scaffolding
org.gmod.schema.general.Db_ESTest_scaffolding
org.gmod.schema.general.DbXRef_ESTest_scaffolding
org.gmod.schema.general.Tableinfo_ESTest_scaffolding
org.gmod.schema.organism.Organism_ESTest_scaffolding
org.gmod.schema.organism.OrganismProp_ESTest_scaffolding
org.gmod.schema.phylogeny.Phylonode_ESTest_scaffolding
org.gmod.schema.phylogeny.PhylonodeDbXRef_ESTest_scaffolding
org.gmod.schema.phylogeny.PhylonodeProp_ESTest_scaffolding
org.gmod.schema.phylogeny.PhylonodePub_ESTest_scaffolding
org.gmod.schema.phylogeny.PhylonodeRelationship_ESTest_scaffolding
org.gmod.schema.phylogeny.Phylotree_ESTest_scaffolding
org.gmod.schema.phylogeny.PhylotreePub_ESTest_scaffolding
org.gmod.schema.pub.Pub_ESTest_scaffolding
org.gmod.schema.pub.PubAuthor_ESTest_scaffolding
org.gmod.schema.pub.PubDbXRef_ESTest_scaffolding
org.gmod.schema.pub.PubProp_ESTest_scaffolding
org.gmod.schema.pub.PubRelationship_ESTest_scaffolding
org.gmod.schema.sequence.Feature_ESTest_scaffolding
org.gmod.schema.sequence.FeatureCvTerm_ESTest_scaffolding
org.gmod.schema.sequence.FeatureCvTermDbXRef_ESTest_scaffolding
org.gmod.schema.sequence.FeatureCvTermPub_ESTest_scaffolding
org.gmod.schema.sequence.FeatureDbXRef_ESTest_scaffolding
org.gmod.schema.sequence.FeatureLoc_ESTest_scaffolding
org.gmod.schema.sequence.FeatureLocPub_ESTest_scaffolding
org.gmod.schema.sequence.FeatureProp_ESTest_scaffolding
org.gmod.schema.sequence.FeaturePropPub_ESTest_scaffolding
org.gmod.schema.sequence.FeaturePub_ESTest_scaffolding
org.gmod.schema.sequence.FeatureRelationship_ESTest_scaffolding
org.gmod.schema.sequence.FeatureRelationshipProp_ESTest_scaffolding
org.gmod.schema.sequence.FeatureRelationshipPropPub_ESTest_scaffolding
org.gmod.schema.sequence.FeatureRelationshipPub_ESTest_scaffolding
org.gmod.schema.sequence.Synonym_ESTest_scaffolding
org.gmod.schema.utils.CollectionUtils_ESTest_scaffolding
uk.ac.sanger.artemis.Action_ESTest_scaffolding
uk.ac.sanger.artemis.ActionVector_ESTest_scaffolding
uk.ac.sanger.artemis.AlignMatch_ESTest_scaffolding
uk.ac.sanger.artemis.AlignMatchVector_ESTest_scaffolding
uk.ac.sanger.artemis.AlignmentSelectionChangeEvent_ESTest_scaffolding
uk.ac.sanger.artemis.chado.ArtemisUtils_ESTest_scaffolding
uk.ac.sanger.artemis.chado.ChadoDemo_ESTest_scaffolding
uk.ac.sanger.artemis.chado.ChadoTransaction_ESTest_scaffolding
uk.ac.sanger.artemis.chado.FeatureForUpdatingResidues_ESTest_scaffolding
uk.ac.sanger.artemis.chado.FeatureLocLazyQualifierValue_ESTest_scaffolding
uk.ac.sanger.artemis.chado.GmodDAO_ESTest_scaffolding
uk.ac.sanger.artemis.chado.Graph_ESTest_scaffolding
uk.ac.sanger.artemis.chado.IBatisDAO_ESTest_scaffolding
uk.ac.sanger.artemis.chado.JdbcDAO_ESTest_scaffolding
uk.ac.sanger.artemis.chado.SqlMapClientWrapper_ESTest_scaffolding
uk.ac.sanger.artemis.ChangeEvent_ESTest_scaffolding
uk.ac.sanger.artemis.ChangeEventVector_ESTest_scaffolding
uk.ac.sanger.artemis.circular.Block_ESTest_scaffolding
uk.ac.sanger.artemis.circular.digest.CircularGenomeController_ESTest_scaffolding
uk.ac.sanger.artemis.circular.digest.EmbossDigestParser_ESTest_scaffolding
uk.ac.sanger.artemis.circular.digest.EmbossTableParser_ESTest_scaffolding
uk.ac.sanger.artemis.circular.digest.FileSelectionPanel_ESTest_scaffolding
uk.ac.sanger.artemis.circular.digest.FragmentBand_ESTest_scaffolding
uk.ac.sanger.artemis.circular.digest.InSilicoGelPanel_ESTest_scaffolding
uk.ac.sanger.artemis.circular.digest.ReportDetails_ESTest_scaffolding
uk.ac.sanger.artemis.circular.digest.Utils_ESTest_scaffolding
uk.ac.sanger.artemis.circular.DNADraw_ESTest_scaffolding
uk.ac.sanger.artemis.circular.EmbossCirdnaReader_ESTest_scaffolding
uk.ac.sanger.artemis.circular.GCGraph_ESTest_scaffolding
uk.ac.sanger.artemis.circular.GeneticMarker_ESTest_scaffolding
uk.ac.sanger.artemis.circular.Graph_ESTest_scaffolding
uk.ac.sanger.artemis.circular.LineAttribute_ESTest_scaffolding
uk.ac.sanger.artemis.circular.MemoryComboBox_ESTest_scaffolding
uk.ac.sanger.artemis.circular.PrintDNAImage_ESTest_scaffolding
uk.ac.sanger.artemis.circular.ProgressFrame_ESTest_scaffolding
uk.ac.sanger.artemis.circular.RestrictionEnzyme_ESTest_scaffolding
uk.ac.sanger.artemis.circular.ScrollPanel_ESTest_scaffolding
uk.ac.sanger.artemis.circular.SequenceData_ESTest_scaffolding
uk.ac.sanger.artemis.circular.TextFieldFloat_ESTest_scaffolding
uk.ac.sanger.artemis.circular.TextFieldSink_ESTest_scaffolding
uk.ac.sanger.artemis.circular.Ticks_ESTest_scaffolding
uk.ac.sanger.artemis.circular.Track_ESTest_scaffolding
uk.ac.sanger.artemis.circular.TrackManager_ESTest_scaffolding
uk.ac.sanger.artemis.circular.UserGraph_ESTest_scaffolding
uk.ac.sanger.artemis.ComparisonDataFactory_ESTest_scaffolding
uk.ac.sanger.artemis.ComparisonDataParseException_ESTest_scaffolding
uk.ac.sanger.artemis.components.ActMain_ESTest_scaffolding
uk.ac.sanger.artemis.components.ActPanelResizer_ESTest_scaffolding
uk.ac.sanger.artemis.components.AlignMatchViewer_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.AbstractGraphPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.BamUtils_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.BamView_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.BamViewRecord_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.CoveragePanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.CRAMReferenceSequenceFile_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.FileSelectionDialog_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.GroupBamFrame_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.LineAttributes_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.LineStyleListRenderer_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.LookSeqPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.MappedReads_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.PrintBamView_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.ReadCount_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.ReadCountDialog_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.ReadGroupsFrame_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.RunSamTools_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.SAMRecordComparator_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.SAMRecordFilter_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.SAMRecordFlagConjunctionPredicate_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.SAMRecordFlagPredicate_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.SAMRecordMapQPredicate_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.SAMRecordSequenceString_ESTest_scaffolding
uk.ac.sanger.artemis.components.alignment.SnpPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.AlignmentEvent_ESTest_scaffolding
uk.ac.sanger.artemis.components.AlignmentViewer_ESTest_scaffolding
uk.ac.sanger.artemis.components.BasePlotGroup_ESTest_scaffolding
uk.ac.sanger.artemis.components.BioJavaEntrySource_ESTest_scaffolding
uk.ac.sanger.artemis.components.CanvasPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.ChoiceFrame_ESTest_scaffolding
uk.ac.sanger.artemis.components.ComparatorDialog_ESTest_scaffolding
uk.ac.sanger.artemis.components.ComparatorGlue_ESTest_scaffolding
uk.ac.sanger.artemis.components.ContigTool_ESTest_scaffolding
uk.ac.sanger.artemis.components.database.DatabaseEntrySource_ESTest_scaffolding
uk.ac.sanger.artemis.components.database.DatabaseJPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.database.DatabaseJTree_ESTest_scaffolding
uk.ac.sanger.artemis.components.database.DatabaseLoginPrompt_ESTest_scaffolding
uk.ac.sanger.artemis.components.database.DatabaseLoginPromptConsole_ESTest_scaffolding
uk.ac.sanger.artemis.components.database.DatabaseTreeNode_ESTest_scaffolding
uk.ac.sanger.artemis.components.DbfetchEntrySource_ESTest_scaffolding
uk.ac.sanger.artemis.components.DisplayAdjustmentEvent_ESTest_scaffolding
uk.ac.sanger.artemis.components.EntryEditVector_ESTest_scaffolding
uk.ac.sanger.artemis.components.EntryFileDialog_ESTest_scaffolding
uk.ac.sanger.artemis.components.EntryGroupPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.EntryHeaderEdit_ESTest_scaffolding
uk.ac.sanger.artemis.components.ExternalProgramOptions_ESTest_scaffolding
uk.ac.sanger.artemis.components.FeatureAminoAcidViewer_ESTest_scaffolding
uk.ac.sanger.artemis.components.FeatureDatabasePredicate_ESTest_scaffolding
uk.ac.sanger.artemis.components.FeatureDisplay_ESTest_scaffolding
uk.ac.sanger.artemis.components.FeatureEdit_ESTest_scaffolding
uk.ac.sanger.artemis.components.FeatureList_ESTest_scaffolding
uk.ac.sanger.artemis.components.FeatureListFrame_ESTest_scaffolding
uk.ac.sanger.artemis.components.FeatureViewer_ESTest_scaffolding
uk.ac.sanger.artemis.components.FileDialogEntrySource_ESTest_scaffolding
uk.ac.sanger.artemis.components.filetree.AbstractCellEditor_ESTest_scaffolding
uk.ac.sanger.artemis.components.filetree.FileList_ESTest_scaffolding
uk.ac.sanger.artemis.components.filetree.FileSystemModel_ESTest_scaffolding
uk.ac.sanger.artemis.components.filetree.JTreeTable_ESTest_scaffolding
uk.ac.sanger.artemis.components.filetree.LocalAndRemoteFileManager_ESTest_scaffolding
uk.ac.sanger.artemis.components.filetree.RemoteFileNode_ESTest_scaffolding
uk.ac.sanger.artemis.components.filetree.SshJTreeTable_ESTest_scaffolding
uk.ac.sanger.artemis.components.filetree.TreeTableModelAdapter_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.AutoCompleteComboDocument_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.BasicGeneBuilderFrame_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.BasicProteinMapPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.ButtonPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.cv.AbstractCvBox_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.cv.ControlledCurationBox_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.cv.CVPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.cv.CvTermsComparator_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.cv.CvTermSelector_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.cv.DatePanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.cv.GoBox_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.cv.ProductBox_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.cv.WrapTextArea_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.GeneComponentTree_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.GeneEdit_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.GeneEditorPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.GeneUtils_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.gff.AddButton_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.gff.BasicPropertiesPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.gff.RemoveButton_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.MapPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.OpenSectionButton_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.ortholog.AbstractMatchTable_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.ortholog.MatchPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.ortholog.OrthoParalogTable_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.ortholog.SimilarityTable_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.ProteinMapPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.genebuilder.ReferencesPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.GraphMenu_ESTest_scaffolding
uk.ac.sanger.artemis.components.IndexReferenceEvent_ESTest_scaffolding
uk.ac.sanger.artemis.components.InputStreamProgressDialog_ESTest_scaffolding
uk.ac.sanger.artemis.components.KeyChoice_ESTest_scaffolding
uk.ac.sanger.artemis.components.KeyChooser_ESTest_scaffolding
uk.ac.sanger.artemis.components.LogReadListener_ESTest_scaffolding
uk.ac.sanger.artemis.components.MarkerRangeRequester_ESTest_scaffolding
uk.ac.sanger.artemis.components.MultiComparator_ESTest_scaffolding
uk.ac.sanger.artemis.components.Navigator_ESTest_scaffolding
uk.ac.sanger.artemis.components.NonModalDialog_ESTest_scaffolding
uk.ac.sanger.artemis.components.Plot_ESTest_scaffolding
uk.ac.sanger.artemis.components.PrintACT_ESTest_scaffolding
uk.ac.sanger.artemis.components.PrintArtemis_ESTest_scaffolding
uk.ac.sanger.artemis.components.ProcessWatcher_ESTest_scaffolding
uk.ac.sanger.artemis.components.ProcessWatcherEvent_ESTest_scaffolding
uk.ac.sanger.artemis.components.ProgressBarFrame_ESTest_scaffolding
uk.ac.sanger.artemis.components.ProgressThread_ESTest_scaffolding
uk.ac.sanger.artemis.components.ProjectProperty_ESTest_scaffolding
uk.ac.sanger.artemis.components.QualifierChoice_ESTest_scaffolding
uk.ac.sanger.artemis.components.QualifierEditor_ESTest_scaffolding
uk.ac.sanger.artemis.components.QualifierPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.QualifierTextArea_ESTest_scaffolding
uk.ac.sanger.artemis.components.RunBlastAtNCBI_ESTest_scaffolding
uk.ac.sanger.artemis.components.RunMenu_ESTest_scaffolding
uk.ac.sanger.artemis.components.RunPfamSearchThread_ESTest_scaffolding
uk.ac.sanger.artemis.components.ScoreChangeEvent_ESTest_scaffolding
uk.ac.sanger.artemis.components.ScoreScrollbar_ESTest_scaffolding
uk.ac.sanger.artemis.components.SegmentBorder_ESTest_scaffolding
uk.ac.sanger.artemis.components.SelectionInfoDisplay_ESTest_scaffolding
uk.ac.sanger.artemis.components.SelectionMenu_ESTest_scaffolding
uk.ac.sanger.artemis.components.SelectionSubMenu_ESTest_scaffolding
uk.ac.sanger.artemis.components.SelectionViewer_ESTest_scaffolding
uk.ac.sanger.artemis.components.Selector_ESTest_scaffolding
uk.ac.sanger.artemis.components.SequenceComboBox_ESTest_scaffolding
uk.ac.sanger.artemis.components.ShortCut_ESTest_scaffolding
uk.ac.sanger.artemis.components.Splash_ESTest_scaffolding
uk.ac.sanger.artemis.components.StickyFileChooser_ESTest_scaffolding
uk.ac.sanger.artemis.components.SwingWorker_ESTest_scaffolding
uk.ac.sanger.artemis.components.TextDialog_ESTest_scaffolding
uk.ac.sanger.artemis.components.TextFieldSink_ESTest_scaffolding
uk.ac.sanger.artemis.components.TextRequesterEvent_ESTest_scaffolding
uk.ac.sanger.artemis.components.TransferableContig_ESTest_scaffolding
uk.ac.sanger.artemis.components.TransferAnnotationTool_ESTest_scaffolding
uk.ac.sanger.artemis.components.TransferFeaturePredicate_ESTest_scaffolding
uk.ac.sanger.artemis.components.UserDefinedQualifiers_ESTest_scaffolding
uk.ac.sanger.artemis.components.Utilities_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.BCFIndex_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.BCFReader_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.FeatureContigPredicate_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.FilteredPanel_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.HeaderLine_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.IOUtils_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.MultipleAlleleVariant_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.PrintVCFview_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.RecordFilter_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.TabixReader_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.VariantBase_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.VCFFilter_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.VCFRecord_ESTest_scaffolding
uk.ac.sanger.artemis.components.variant.VCFview_ESTest_scaffolding
uk.ac.sanger.artemis.components.WriteMenu_ESTest_scaffolding
uk.ac.sanger.artemis.components.YesNoDialog_ESTest_scaffolding
uk.ac.sanger.artemis.cramtools.ref.ReferenceRegion_ESTest_scaffolding
uk.ac.sanger.artemis.editor.Annotation_ESTest_scaffolding
uk.ac.sanger.artemis.editor.BigPane_ESTest_scaffolding
uk.ac.sanger.artemis.editor.DataViewInternalFrame_ESTest_scaffolding
uk.ac.sanger.artemis.editor.EvidenceViewer_ESTest_scaffolding
uk.ac.sanger.artemis.editor.ExternalApplication_ESTest_scaffolding
uk.ac.sanger.artemis.editor.FastaTextPane_ESTest_scaffolding
uk.ac.sanger.artemis.editor.HitInfo_ESTest_scaffolding
uk.ac.sanger.artemis.editor.MouseOverButton_ESTest_scaffolding
uk.ac.sanger.artemis.editor.PlafMacros_ESTest_scaffolding
uk.ac.sanger.artemis.editor.ScrollPanel_ESTest_scaffolding
uk.ac.sanger.artemis.Entry_ESTest_scaffolding
uk.ac.sanger.artemis.EntryChangeEvent_ESTest_scaffolding
uk.ac.sanger.artemis.EntryGroupChangeEvent_ESTest_scaffolding
uk.ac.sanger.artemis.EntrySourceVector_ESTest_scaffolding
uk.ac.sanger.artemis.ExternalProgram_ESTest_scaffolding
uk.ac.sanger.artemis.ExternalProgramEvent_ESTest_scaffolding
uk.ac.sanger.artemis.ExternalProgramException_ESTest_scaffolding
uk.ac.sanger.artemis.ExternalProgramThread_ESTest_scaffolding
uk.ac.sanger.artemis.FeatureChangeEvent_ESTest_scaffolding
uk.ac.sanger.artemis.FeatureFromVectorPredicate_ESTest_scaffolding
uk.ac.sanger.artemis.FeatureKeyPredicate_ESTest_scaffolding
uk.ac.sanger.artemis.FeatureKeyQualifierPredicate_ESTest_scaffolding
uk.ac.sanger.artemis.FeaturePatternPredicate_ESTest_scaffolding
uk.ac.sanger.artemis.FeaturePredicateVector_ESTest_scaffolding
uk.ac.sanger.artemis.FeatureSegment_ESTest_scaffolding
uk.ac.sanger.artemis.FeatureSegmentVector_ESTest_scaffolding
uk.ac.sanger.artemis.FeatureVector_ESTest_scaffolding
uk.ac.sanger.artemis.FilteredEntryGroup_ESTest_scaffolding
uk.ac.sanger.artemis.GotoEvent_ESTest_scaffolding
uk.ac.sanger.artemis.io.BetweenRange_ESTest_scaffolding
uk.ac.sanger.artemis.io.BioJavaFeature_ESTest_scaffolding
uk.ac.sanger.artemis.io.BlastDocumentEntry_ESTest_scaffolding
uk.ac.sanger.artemis.io.BlastEntryInformation_ESTest_scaffolding
uk.ac.sanger.artemis.io.BlastStreamFeature_ESTest_scaffolding
uk.ac.sanger.artemis.io.ChadoCanonicalGene_ESTest_scaffolding
uk.ac.sanger.artemis.io.DatabaseStreamFeature_ESTest_scaffolding
uk.ac.sanger.artemis.io.EmblDocumentEntry_ESTest_scaffolding
uk.ac.sanger.artemis.io.EmblMisc_ESTest_scaffolding
uk.ac.sanger.artemis.io.EmblStreamFeature_ESTest_scaffolding
uk.ac.sanger.artemis.io.EntryInformationException_ESTest_scaffolding
uk.ac.sanger.artemis.io.EntryStreamEvent_ESTest_scaffolding
uk.ac.sanger.artemis.io.FastaStreamSequence_ESTest_scaffolding
uk.ac.sanger.artemis.io.FeatureHeader_ESTest_scaffolding
uk.ac.sanger.artemis.io.FeatureTable_ESTest_scaffolding
uk.ac.sanger.artemis.io.GenbankDocumentEntry_ESTest_scaffolding
uk.ac.sanger.artemis.io.GenbankMisc_ESTest_scaffolding
uk.ac.sanger.artemis.io.GenbankStreamFeature_ESTest_scaffolding
uk.ac.sanger.artemis.io.GenbankStreamSequence_ESTest_scaffolding
uk.ac.sanger.artemis.io.GFF3AttributeBuilder_ESTest_scaffolding
uk.ac.sanger.artemis.io.GFF3Encoder_ESTest_scaffolding
uk.ac.sanger.artemis.io.GFFEntryInformation_ESTest_scaffolding
uk.ac.sanger.artemis.io.GFFMisc_ESTest_scaffolding
uk.ac.sanger.artemis.io.GFFStreamFeature_ESTest_scaffolding
uk.ac.sanger.artemis.io.GffToEMBL_ESTest_scaffolding
uk.ac.sanger.artemis.io.IndexedGFFDocumentEntry_ESTest_scaffolding
uk.ac.sanger.artemis.io.InvalidKeyException_ESTest_scaffolding
uk.ac.sanger.artemis.io.InvalidRelationException_ESTest_scaffolding
uk.ac.sanger.artemis.io.Key_ESTest_scaffolding
uk.ac.sanger.artemis.io.KeyVector_ESTest_scaffolding
uk.ac.sanger.artemis.io.LineGroup_ESTest_scaffolding
uk.ac.sanger.artemis.io.Location_ESTest_scaffolding
uk.ac.sanger.artemis.io.LocationLexer_ESTest_scaffolding
uk.ac.sanger.artemis.io.LowerInteger_ESTest_scaffolding
uk.ac.sanger.artemis.io.MiscLineGroup_ESTest_scaffolding
uk.ac.sanger.artemis.io.MSPcrunchDocumentEntry_ESTest_scaffolding
uk.ac.sanger.artemis.io.MSPcrunchStreamFeature_ESTest_scaffolding
uk.ac.sanger.artemis.io.OutOfDateException_ESTest_scaffolding
uk.ac.sanger.artemis.io.PartialSequence_ESTest_scaffolding
uk.ac.sanger.artemis.io.PublicDBDocumentEntry_ESTest_scaffolding
uk.ac.sanger.artemis.io.PublicDBStreamFeature_ESTest_scaffolding
uk.ac.sanger.artemis.io.Qualifier_ESTest_scaffolding
uk.ac.sanger.artemis.io.QualifierInfo_ESTest_scaffolding
uk.ac.sanger.artemis.io.QualifierInfoException_ESTest_scaffolding
uk.ac.sanger.artemis.io.QualifierInfoHash_ESTest_scaffolding
uk.ac.sanger.artemis.io.QualifierInfoVector_ESTest_scaffolding
uk.ac.sanger.artemis.io.QualifierLazyLoading_ESTest_scaffolding
uk.ac.sanger.artemis.io.QualifierParseException_ESTest_scaffolding
uk.ac.sanger.artemis.io.QualifierVector_ESTest_scaffolding
uk.ac.sanger.artemis.io.Range_ESTest_scaffolding
uk.ac.sanger.artemis.io.RangeVector_ESTest_scaffolding
uk.ac.sanger.artemis.io.RawStreamSequence_ESTest_scaffolding
uk.ac.sanger.artemis.io.ReadAndWriteEntry_ESTest_scaffolding
uk.ac.sanger.artemis.io.ReadEvent_ESTest_scaffolding
uk.ac.sanger.artemis.io.ReadFormatException_ESTest_scaffolding
uk.ac.sanger.artemis.io.ReadOnlyEntry_ESTest_scaffolding
uk.ac.sanger.artemis.io.SimpleDocumentEntry_ESTest_scaffolding
uk.ac.sanger.artemis.io.SimpleDocumentFeature_ESTest_scaffolding
uk.ac.sanger.artemis.io.StreamFeatureTable_ESTest_scaffolding
uk.ac.sanger.artemis.io.StreamSequence_ESTest_scaffolding
uk.ac.sanger.artemis.io.UIEraserThread_ESTest_scaffolding
uk.ac.sanger.artemis.io.UpperInteger_ESTest_scaffolding
uk.ac.sanger.artemis.io.ValidateFeature_ESTest_scaffolding
uk.ac.sanger.artemis.j2ssh.FileTransferProgressMonitor_ESTest_scaffolding
uk.ac.sanger.artemis.j2ssh.FTProgress_ESTest_scaffolding
uk.ac.sanger.artemis.j2ssh.SshFileManager_ESTest_scaffolding
uk.ac.sanger.artemis.j2ssh.SshLogin_ESTest_scaffolding
uk.ac.sanger.artemis.j2ssh.SshPSUClient_ESTest_scaffolding
uk.ac.sanger.artemis.LastSegmentException_ESTest_scaffolding
uk.ac.sanger.artemis.MegaBlastComparisonData_ESTest_scaffolding
uk.ac.sanger.artemis.MSPcrunchComparisonData_ESTest_scaffolding
uk.ac.sanger.artemis.MUMmerComparisonData_ESTest_scaffolding
uk.ac.sanger.artemis.OptionChangeEvent_ESTest_scaffolding
uk.ac.sanger.artemis.plot.AGWindowAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.ATDeviationAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.BaseAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.Codon12CorrelationAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.CodonUsageAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.CodonUsageFormatException_ESTest_scaffolding
uk.ac.sanger.artemis.plot.CodonUsageWeight_ESTest_scaffolding
uk.ac.sanger.artemis.plot.CodonWeight_ESTest_scaffolding
uk.ac.sanger.artemis.plot.CSCSAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.CumulativeATSkewAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.CumulativeGCSkewAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.EntropyAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.GCDeviationAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.GCFrameAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.GCSDWindowAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.GCWindowAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.HydroAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.HydrophilicityAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.HydrophobicityAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.ICDIAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.MRIAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.NcAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.PositionalAsymmetryAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.ScaledChiAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.plot.UserDataAlgorithm_ESTest_scaffolding
uk.ac.sanger.artemis.PositionComparator_ESTest_scaffolding
uk.ac.sanger.artemis.ProcessMonitor_ESTest_scaffolding
uk.ac.sanger.artemis.Selection_ESTest_scaffolding
uk.ac.sanger.artemis.sequence.AminoAcidSequence_ESTest_scaffolding
uk.ac.sanger.artemis.sequence.BasePattern_ESTest_scaffolding
uk.ac.sanger.artemis.sequence.BasePatternFormatException_ESTest_scaffolding
uk.ac.sanger.artemis.sequence.Bases_ESTest_scaffolding
uk.ac.sanger.artemis.sequence.Marker_ESTest_scaffolding
uk.ac.sanger.artemis.sequence.MarkerChangeEvent_ESTest_scaffolding
uk.ac.sanger.artemis.sequence.MarkerInternal_ESTest_scaffolding
uk.ac.sanger.artemis.sequence.MarkerRange_ESTest_scaffolding
uk.ac.sanger.artemis.sequence.SequenceChangeEvent_ESTest_scaffolding
uk.ac.sanger.artemis.sequence.Strand_ESTest_scaffolding
uk.ac.sanger.artemis.SimpleComparisonData_ESTest_scaffolding
uk.ac.sanger.artemis.SimpleEntryGroup_ESTest_scaffolding
uk.ac.sanger.artemis.SimpleExternalProgramMonitor_ESTest_scaffolding
uk.ac.sanger.artemis.SimpleGotoEventSource_ESTest_scaffolding
uk.ac.sanger.artemis.util.CacheHashMap_ESTest_scaffolding
uk.ac.sanger.artemis.util.DatabaseDocument_ESTest_scaffolding
uk.ac.sanger.artemis.util.DatabaseLocationParser_ESTest_scaffolding
uk.ac.sanger.artemis.util.Document_ESTest_scaffolding
uk.ac.sanger.artemis.util.DocumentBlockCompressed_ESTest_scaffolding
uk.ac.sanger.artemis.util.DocumentFactory_ESTest_scaffolding
uk.ac.sanger.artemis.util.FastVector_ESTest_scaffolding
uk.ac.sanger.artemis.util.FileDocument_ESTest_scaffolding
uk.ac.sanger.artemis.util.FTPSeekableStream_ESTest_scaffolding
uk.ac.sanger.artemis.util.InputStreamProgressEvent_ESTest_scaffolding
uk.ac.sanger.artemis.util.InputStreamProgressListenerVector_ESTest_scaffolding
uk.ac.sanger.artemis.util.LargeObjectDocument_ESTest_scaffolding
uk.ac.sanger.artemis.util.ProgressInputStream_ESTest_scaffolding
uk.ac.sanger.artemis.util.PushBackException_ESTest_scaffolding
uk.ac.sanger.artemis.util.ReadOnlyException_ESTest_scaffolding
uk.ac.sanger.artemis.util.RemoteFileDocument_ESTest_scaffolding
uk.ac.sanger.artemis.util.TextDocument_ESTest_scaffolding
uk.ac.sanger.artemis.util.URLDocument_ESTest_scaffolding
uk.ac.sanger.artemis.util.WorkingGZIPInputStream_ESTest_scaffolding
uk.ac.sanger.artemis.util.ZipFileDocument_ESTest_scaffolding