From eea2acdfa76cfee85f04ac113b6a4a620d7afe59 Mon Sep 17 00:00:00 2001 From: Jordan DeKraker Date: Wed, 26 Jun 2024 09:38:42 -0400 Subject: [PATCH] added coords for templateseg workflow (#304) --- hippunfold/config/snakebids.yml | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/hippunfold/config/snakebids.yml b/hippunfold/config/snakebids.yml index 523fbf6f..abb4b584 100644 --- a/hippunfold/config/snakebids.yml +++ b/hippunfold/config/snakebids.yml @@ -391,6 +391,10 @@ template_based_segmentation: hemi: - R - L + dHCP: + hemi: + - R + - L template_files: @@ -410,6 +414,7 @@ template_files: crop_ref: tpl-dHCP_cohort-1_res-1_space-corobl_hemi-{hemi}_T2w.nii.gz crop_refT1w: tpl-dHCP_cohort-1_res-1_space-corobl_hemi-{hemi}_T1w.nii.gz Mask_crop: tpl-dHCP_cohort-1_res-1_space-corobl_hemi-{hemi}_desc-hipp_mask.nii.gz + coords: tpl-dHCP_dir-{dir}_hemi-{hemi}_space-corobl_label-{autotop}_desc-laplace_coords.nii.gz MBMv2: T1w: Template_sym_MTR_80um.nii.gz T2w: Template_sym_T2_80um.nii.gz