- Pipeline indexation
- Pipeline query
- README pipelines
- README per module
- COOKBOOK with small examples
- Dependences:
- prodigal: https://github.com/hyattpd/Prodigal/wiki/installation must be in your $PATH
- cd-hit-est: https://github.com/weizhongli/cdhit must be in your $PATH`
- minimap2
- seqwish
- vg
- Image Docker