diff --git a/pkg/client/client_test.go b/pkg/client/client_test.go
index 68cdc354..2474c7a2 100644
--- a/pkg/client/client_test.go
+++ b/pkg/client/client_test.go
@@ -898,11 +898,11 @@ func TestTestResolveMetadataInJsonStrWithPackage(t *testing.T) {
 	assert.Equal(t, err, nil)
 
 	assert.Equal(t, res, string(expectedDepStr))
-	
+
 	defer func() {
 		err = os.RemoveAll(vendorDir)
 		assert.Equal(t, err, nil)
-	} ()	
+	}()
 }
 
 func TestPkgWithInVendorMode(t *testing.T) {
@@ -1212,7 +1212,7 @@ func TestRunWithGitPackage(t *testing.T) {
 	assert.Equal(t, err, nil)
 	expectedCompileResult := `{"apiVersion": "v1", "kind": "Pod", "metadata": {"name": "web-app"}, "spec": {"containers": [{"image": "nginx", "name": "main-container", "ports": [{"containerPort": 80}]}]}}`
 	assert.Equal(t, expectedCompileResult, compileResult.GetRawJsonResult())
-	
+
 	assert.Equal(t, utils.DirExists(filepath.Join(pkgPath, "kcl.mod.lock")), true)
 
 	defer func() {
@@ -2130,6 +2130,10 @@ func TestRunLocalWithArgs(t *testing.T) {
 		}, []string{
 			filepath.Join(pkgPath, "with_args", "run_11", "sub", "kcl.yaml"),
 		}, "", false, "", "The_sub_kcl_program: Hello Sub World!"},
+		{[]string{
+			filepath.Join(pkgPath, "with_args", "run_12", "sub1", "main.k"),
+			filepath.Join(pkgPath, "with_args", "run_12", "sub2", "main.k"),
+		}, []string{}, "", false, "", "sub1: 1\nsub2: 2"},
 	}
 
 	for _, test := range tests {
diff --git a/pkg/client/run.go b/pkg/client/run.go
index dd480b7f..b7765331 100644
--- a/pkg/client/run.go
+++ b/pkg/client/run.go
@@ -507,7 +507,8 @@ func (o *RunOptions) getPkgSource() (*downloader.Source, error) {
 					)
 				}
 
-				if !pkgSource.IsPackaged() && !source.IsPackaged() {
+				if !pkgSource.IsPackaged() && !source.IsPackaged() &&
+					pkgSource.IsLocalPkg() && source.IsLocalPkg() {
 					tmpRootPath, err := source.FindRootPath()
 					if err != nil {
 						return nil, err
diff --git a/pkg/client/test_data/test_run_options/with_args/run_12/sub1/main.k b/pkg/client/test_data/test_run_options/with_args/run_12/sub1/main.k
new file mode 100644
index 00000000..03b1da2b
--- /dev/null
+++ b/pkg/client/test_data/test_run_options/with_args/run_12/sub1/main.k
@@ -0,0 +1 @@
+sub1 = 1
\ No newline at end of file
diff --git a/pkg/client/test_data/test_run_options/with_args/run_12/sub2/main.k b/pkg/client/test_data/test_run_options/with_args/run_12/sub2/main.k
new file mode 100644
index 00000000..2ec11cbe
--- /dev/null
+++ b/pkg/client/test_data/test_run_options/with_args/run_12/sub2/main.k
@@ -0,0 +1 @@
+sub2 = 2
\ No newline at end of file
diff --git a/pkg/downloader/source.go b/pkg/downloader/source.go
index e9274340..7c173a74 100644
--- a/pkg/downloader/source.go
+++ b/pkg/downloader/source.go
@@ -77,6 +77,14 @@ func (source *Source) IsPackaged() bool {
 	return source.IsLocalTarPath() || source.Git != nil || source.Oci != nil || source.Registry != nil
 }
 
+// If the source is a local path, check if it is a real local package(a directory with kcl.mod file).
+func (source *Source) IsLocalPkg() bool {
+	if source.IsLocalPath() {
+		return utils.DirExists(filepath.Join(source.Local.Path, constants.KCL_MOD))
+	}
+	return false
+}
+
 func (source *Source) FindRootPath() (string, error) {
 	if source == nil {
 		return "", fmt.Errorf("source is nil")