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Troubles with PhaMers installation by setup.py #2

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ptynecki opened this issue Jul 30, 2019 · 3 comments
Open

Troubles with PhaMers installation by setup.py #2

ptynecki opened this issue Jul 30, 2019 · 3 comments

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@ptynecki
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ptynecki commented Jul 30, 2019

Hey,

I tried to install package version from master branch but I discovered some issues.

To install the package with setup.py you should rename README.md to README.txt file. Setup script requires it as long_description argument.

After fixing that, there is another exception:

error: package directory 'phamers' does not exist

Thanks

@ptynecki ptynecki changed the title No such file or directory: 'README.txt No such file or directory: README.txt Jul 30, 2019
@ptynecki ptynecki changed the title No such file or directory: README.txt Troubles with PhaMers installation by setup.py Jul 30, 2019
@jondeaton
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jondeaton commented Jul 30, 2019

Hey,

Sorry about those issues that you are having. I just pushed a patch that should make it easier to install the dependencies. You can simply run

pip install -r requirements.txt

to install the dependencies. Let me know if that works for you.

@ptynecki
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Thanks. It was helpful. Installation works.

Btw. dna-features-viewer 1.0 requires matplotlib >=3, and matplotlib requires Python 3+.

It will be a good move to rewrite the codebase of you program to Python 3.6+.

@jondeaton
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Yes, I agree, switching to Python 3 would be a good move.

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