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CHANGELOG.md

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[2.1.1] - 2016-02-15

FIXED

  • Image objects behave properly when passed to numpy functions. Things like np.mean will now return scalar values as expected, instead of Image objects

[2.1.0] - 2016-01-16

ADDED

  • select now supports start and stop keyword arguments to put bounds on images

[2.0.2] - 2016-01-06

ADDED

  • Nd2.pixel_microns gives the width of a pixel

[2.0.1] - 2016-01-06

FIXED

  • Channel name parsing issue
  • select method works for files with a single frame

[2.0.0] - 2015-12-20

ADDED

  • select() method to rapidly iterate over a subset of images matching certain criteria
  • We parse metadata relating to the physical camera used to produce the images
  • Raw metadata can be accessed conveniently, to allow contributors to find more interesting things to add
  • An XML parsing library was added since the raw metadata contains some XML blocks
  • The version number is now available in the nd2reader module
  • Created a DOI to allow citation of the code

FIXED

  • Channel names were not always being parsed properly

REMOVED

  • The ImageGroup container object
  • The data attribute on Images. Images now inherit from ndarray, making this redundant
  • The image_sets iterator

[1.1.4] - 2015-10-27

FIXED

  • Implemented missing get_image_by_attributes method

[1.1.3] - 2015-10-16

FIXED

  • ND2s with a single image can now be parsed

[1.1.2] - 2015-10-09

ADDED

  • Image objects now have a frame_number attribute.
  • Nd2 can be used as a context manager
  • More unit tests and functional tests

CHANGED

  • Image objects now directly subclass Numpy arrays
  • Refactored code to permit parsing of different versions of ND2s, which will allow us to add support for NIS Elements 3.x.

DEPRECATED

  • The data attribute is no longer needed since Image is now a Numpy array
  • The image_sets iterator will be removed in the near future. You should implement this yourself

[1.1.1] - 2015-09-02

FIXED

  • Images returned by indexing would sometimes be skipped when the file contained multiple channels

CHANGED

  • Dockerfile now installs scikit-image to make visual testing possible

[1.1.0] - 2015-06-03

ADDED

  • Indexing and slicing of images
  • Python 3 support
  • Dockerfile support for Python 3.4
  • Makefile commands for convenient testing in Docker
  • Unit tests

CHANGED

  • Switched to setuptools to automatically install missing dependencies
  • Made the interface for most metadata public
  • Refactored some poorly-named things

[1.0.0] - 2015-05-23

ADDED

  • First stable release!