balck format

janelia-cellmap · Apr 16, 2024 · 0b443d4 · 0b443d4
1 parent 690da60
commit 0b443d4
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Showing 3 changed files with 7 additions and 7 deletions.
diff --git a/dacapo/experiments/datasplits/datasets/arrays/zarr_array.py b/dacapo/experiments/datasplits/datasets/arrays/zarr_array.py
@@ -108,7 +108,6 @@ def __init__(self, array_config):
         self._attributes = self.data.attrs
         self._axes = array_config._axes
         self.snap_to_grid = array_config.snap_to_grid
-
 
     def __str__(self):
         """
@@ -144,7 +143,7 @@ def __repr__(self):
 
         """
         return f"ZarrArray({self.file_name}, {self.dataset})"
-    
+
     @property
     def mode(self):
         if not hasattr(self, "_mode"):
@@ -421,7 +420,7 @@ def create_from_array_identifier(
         num_channels,
         voxel_size,
         dtype,
-        mode = "a",
+        mode="a",
         write_size=None,
         name=None,
         overwrite=False,

diff --git a/dacapo/experiments/datasplits/datasplit_generator.py b/dacapo/experiments/datasplits/datasplit_generator.py
@@ -125,7 +125,7 @@ def get_right_resolution_array_config(
         file_name=container,
         dataset=str(current_dataset_path),
         snap_to_grid=target_resolution,
-        mode = "r"
+        mode="r",
     )
     zarr_array = ZarrArray(zarr_config)
     while (
@@ -138,7 +138,7 @@ def get_right_resolution_array_config(
             file_name=container,
             dataset=str(Path(dataset, f"s{level}")),
             snap_to_grid=target_resolution,
-            mode = "r"
+            mode="r",
         )
 
         zarr_array = ZarrArray(zarr_config)

diff --git a/dacapo/experiments/run.py b/dacapo/experiments/run.py
@@ -110,7 +110,6 @@ def __init__(self, run_config, load_starter_model: bool = True):
 
         # lazy load datasplit
         self._datasplit = None
-
 
         # combined pieces
         self.model = self.task.create_model(self.architecture)
@@ -156,7 +155,9 @@ def datasplit(self):
     def validation_scores(self):
         if self._validation_scores is None:
             self._validation_scores = ValidationScores(
-                self.task.parameters, self.datasplit.validate, self.task.evaluation_scores
+                self.task.parameters,
+                self.datasplit.validate,
+                self.task.evaluation_scores,
             )
         return self._validation_scores