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other file formats and data models for annotated arrays #5

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neuromusic opened this issue Jul 9, 2019 · 1 comment
Open

other file formats and data models for annotated arrays #5

neuromusic opened this issue Jul 9, 2019 · 1 comment

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@neuromusic
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In your landscaping, it might be worth calling out other file formats for annotated arrays. Building a schema on top of these standards could facilitate interoperability.

  • netCDF (R, Python, C++, Java, others)
  • zarr (Python)
  • xarray (Python)
  • tile.db (C++, Python, others)
@ivirshup
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Yup, a few of these had come up in previous discussion with @LTLA. The idea of Arrow/ Parquet had also come up.

I like the idea of xarray/ netCDF for the existing infrastructure, though it's unclear to me what the status is of sparse data for netCDF. There has been a little discussion of this on the xarray sparse issue (pydata/xarray#1375).

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