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Outer Segment
Brian Wandell edited this page Dec 30, 2016
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The outer segment class converts the absorptions (isomerizations, really) into photocurrent.
The base class (outersegment) is not implemented. Rather, we have implemented two subclasses of the general @outersegment class. These are
os = osBioPhys; or
os = osLinear;
The base class parameters only include a specification of how to compute the noise, and the default time step to use for the different equations that define the model.
obj.noiseFlag = 'random'; % or 'frozen' or 'none'
obj.timeStep = 1e-4; % Sec
Each subclass implements an os.compute() function.
The biophysical model parameters are stored in
os.model
os.linearFilters