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Code refactoring #2

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4 of 5 tasks
marc-sturm opened this issue Dec 4, 2018 · 0 comments
Open
4 of 5 tasks

Code refactoring #2

marc-sturm opened this issue Dec 4, 2018 · 0 comments

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@marc-sturm
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marc-sturm commented Dec 4, 2018 •
edited by GermanDemidov
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  • remove parameter '--folderWithScript'
  • refactor code to split germline from somatic analysis (put it into the germline folder)
  • rename script to something else than firstStep.R, perhaps clincnv.R
  • add example data for each use-case => use as unit tests
  • check minimum version of R (3.2)
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