pyproject.toml

[build-system]
requires = ["setuptools"]
build-backend = "setuptools.build_meta"

[tool.pytest.ini_options]
testpaths = ["tests/"]

[tool.coverage.run]
source = ["vivarium_testing_utils"]

[tool.coverage.report]
show_missing = true

[tool.black]
line_length = 94
exclude = '''.*examples.*'''

[tool.isort]
line_length = 94
profile = "black"
multi_line_output = 3 # Vertical Hanging Indent, see https://pypi.org/project/isort/
skip_glob = ["*/examples/*", "**/examples/*"]

[tool.mypy]
# This is the global mypy configuration.
strict = true  # See all the enabled flags `mypy --help | grep -A 10 'Strict mode'`
disallow_any_unimported = false
implicit_reexport = true
exclude = [
    "build",
    "setup.py",
    "docs/source/conf.py",
]

# handle mypy errors when 3rd party packages are not typed.
[[tool.mypy.overrides]]
module = [
    "py._path.local",
    "scipy.*",
    # "sklearn.*",
]
ignore_missing_imports = true