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Releases: igvteam/igv.js

2.2.17-b2

24 Sep 06:24
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September 2019
Minor patch fixing a bug affecting the gene search service for the igv web app.

2.2.17

24 Sep 06:00
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Small release that fixes a bug that disabled "expand" mode for annotation tracks.

2.2.16

24 Sep 06:12
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This release contains optimizations for large, non-indexed files.

  • Display of whole genome view is now limited to tracks with < 100,000 features.
  • Optimizations to support large wig tracks (> 10,000 features). Note bigwig format is still recommended.

New features:

  • Add counts of deletions and insertions to coverage track popup.
  • Add support for UCSC track line.

2.2.15

24 Sep 06:23
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August 2019
This release has some minor enhancements and a significant optimization for deep coverage alignment tracks, and other tracks that have large numbers of rows. Canvas rendering is now limited to ~ 2x the vertical dimension currently in view, rather than the entire vertical dimension of the underlying track. As the view is scrolled vertically the backing canvas is re-rendered as needed.

  • Limit vertical size of canvas to what's in view + 2x screen height.
  • Increase default samplingDepth for BAM files to 1,000.
  • Support for VCF "SV" variants.
  • Display correct genomic positions in whole-genome view popup text.

2.2.14

24 Sep 06:29
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July 2019

Update the GTEx parser to default to the current release (v8)

2.2.13

24 Sep 06:36
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June 2019

Minor bug fix affecting row packing for annotation files in "expanded" display mode.

2.2.12

24 Sep 06:39
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June 2019

This release contains cosmetic improvements to the navigation / control bar, as well as bug fixes affecting button size and layout on small screens. It also adds support for alternative Google storage url forms requiring oAuth authentication, specifically GCS urls beginning with https://www.googleapis.com/storage and https://storage.cloud.google.com.

2.2.2

25 Jan 16:19
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Remove global CSS rules

2.0.1

20 Oct 02:51
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October 2018

Bug fixes

  • Misc bugs if igv.js is initially opened in a hidden element (tabs, modals, etc).
  • RNA-Seq splice connectors not shown if left block is out of view

Features

  • Color menu for annotation tracks
  • CIViC variant track

v1.0.1

12 Apr 18:57
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  • Improved feature label placement on features partially out-of-view.
  • Deletions were not being rendered properly in GA4GH alignment tracks.
  • GA4GH calls with authentication were failing with CORS errors.