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Please add list of dependencies needed for installation #7

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kortschak opened this issue Mar 2, 2018 · 2 comments
Closed

Please add list of dependencies needed for installation #7

kortschak opened this issue Mar 2, 2018 · 2 comments

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@kortschak
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In assessing whether the package satisfies the installability criterion for openjournals/joss-reviews#593 I ran into a small road bump (I don't use phangorn, which is why this arose).

The install process halted with an error in installing igraph because of a lack of libxml2-dev on my system. It would be helpful for users if you provided a list of required system packages for each of the supported platforms since the R build systems are pretty unhelpful in pointing users in the right direction when things like this happen.

@iferres
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iferres commented Mar 23, 2018

Hi @kortschak . Sorry for the delay answering this thread. I found other people have had the same problem with the igraph package installation. I added a paragraph at README.md pointing out the igraph system requirements. Thanks for the note.

By the way, could you finally install and test the functionality of phylen?

@kortschak
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Thank you, that addresses it.

Yes, I' managed to install the software, but I was waiting for unit tests before I go ahead an look at functionality. I'll hopefully get to that over the next week.

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