Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

error executing - snakemake uses strict mode #77

Open
Kiliankleemann opened this issue Sep 1, 2023 · 0 comments
Open

error executing - snakemake uses strict mode #77

Kiliankleemann opened this issue Sep 1, 2023 · 0 comments

Comments

@Kiliankleemann
Copy link

/Users/kiliankleemann/SalmonTE/salmon/darwin/bin/salmon quant -i /Users/kiliankleemann/SalmonTE/reference/mm -l A -r /var/folders/p1/w5vpt8z97n3f8xvc8kzc87nc0000gn/T/tmpvc3znywe/DE12NGSUKBR137309_1.fastq.gz -o /Volumes/OhneTitel/Anne_BMDM_try_August_2023/SalmonTE_output/DE12NGSUKBR137309_1 -p 4 2>/dev/null
(one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!)

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant