diff --git a/containers/crosswalking/context/main.py b/containers/crosswalking/context/main.py index a1819bd..3f6cec0 100644 --- a/containers/crosswalking/context/main.py +++ b/containers/crosswalking/context/main.py @@ -27,15 +27,15 @@ def crosswalk( table: pd.DataFrame, table_label_column: str, table_clid_column: str, - table_merge_column: str, + table_match_column: str, ) -> anndata.AnnData: """Gives each cell a CL ID and Match type using crosswalk table""" column_map = { table_clid_column: data_clid_column, - table_merge_column: data_match_column, + table_match_column: data_match_column, } table = filter_crosswalk_table( - table, table_label_column, table_clid_column, table_merge_column + table, table_label_column, table_clid_column, table_match_column ) merged_obs = ( matrix.obs.merge(