diff --git a/containers/azimuth/context/download_reference_data.R b/containers/azimuth/context/download_reference_data.R index ee27eab..33dcc84 100644 --- a/containers/azimuth/context/download_reference_data.R +++ b/containers/azimuth/context/download_reference_data.R @@ -8,6 +8,7 @@ output_dir <- args[2] # Load unique reference organs metadata <- fromJSON(file = organ_metadata_file) +metadata <- metadata[sapply(metadata, is.list)] # Remove redirection links references <- unique(sapply(metadata, function(item) item$model)) # Download and install data