diff --git a/containers/azimuth/pipeline.cwl b/containers/azimuth/pipeline.cwl index b288dfe..9b143eb 100644 --- a/containers/azimuth/pipeline.cwl +++ b/containers/azimuth/pipeline.cwl @@ -7,7 +7,7 @@ requirements: dockerPull: ghcr.io/hubmapconsortium/hra-workflows/azimuth:main EnvVarRequirement: envDef: - R_LIBS: $(inputs.options.referenceDataDir) + R_LIBS: $(inputs.options.referenceDataDir.path) SchemaDefRequirement: types: - $import: ./options.yml