New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

ASCT+B Reporter instance for Cell Typologies #740

Open

katyb opened this issue Aug 15, 2023 · 1 comment

katyb commented Aug 15, 2023

J Yu needs to visualize OMAPs, Azimuth data overlaid on cell typologies.
Please create a new instance of the ASCT+B Reporter with these Azimuth cell typologies in standard ASCT+B format loaded:
https://github.com/hubmapconsortium/asctb-azimuth-data-comparison/tree/main/data/asctb_formatted_azimuth_data
e.g., data for PBMC
https://hubmapconsortium.github.io/asctb-azimuth-data-comparison/pbmc.csv
data for bone marrow
https://hubmapconsortium.github.io/asctb-azimuth-data-comparison/bone_marrow.csv
data for brain
https://hubmapconsortium.github.io/asctb-azimuth-data-comparison/motor_cortex.csv
data for fetal
https://hubmapconsortium.github.io/asctb-azimuth-data-comparison/fetal_development.csv
etc.
all linked from https://hubmapconsortium.github.io/asctb-azimuth-data-comparison/ also.

Member

bherr2 commented Aug 15, 2023

@katyb PR is here: #741

Build Preview is here: https://64dbe69da8668a3603f2a95c--ccf-asct-reporter.netlify.app/

Will add more tables tomorrow.

Thanks,
Bruce

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment