cythonize.py

#!/usr/bin/env python
""" cythonize

Cythonize pyx files into C files as needed.

Usage: cythonize [root_dir]

Default [root_dir] is 'pele'.

Checks pyx files to see if they have been changed relative to their
corresponding C files.  If they have, then runs cython on these files to
recreate the C files.

The script thinks that the pyx files have changed relative to the C files
by comparing hashes stored in a database file.

Simple script to invoke Cython (and Tempita) on all .pyx (.pyx.in)
files; while waiting for a proper build system. Uses file hashes to
figure out if rebuild is needed.

For now, this script should be run by developers when changing Cython files
only, and the resulting C files checked in, so that end-users (and Python-only
developers) do not get the Cython/Tempita dependencies.

Originally written by Dag Sverre Seljebotn, and copied here from:

https://raw.github.com/dagss/private-scipy-refactor/cythonize/cythonize.py

Note: this script does not check any of the dependent C libraries; it only
operates on the Cython .pyx files.
"""

from __future__ import division, print_function, absolute_import

import os
import re
import sys
import hashlib
import subprocess

HASH_FILE = 'cythonize.dat'
DEFAULT_ROOT = 'pele'

# WindowsError is not defined on unix systems
try:
    WindowsError
except NameError:
    WindowsError = None
    
_extra_flags = []

#
# Rules
#
def process_pyx(fromfile, tofile):
    try:
        from Cython.Compiler.Version import version as cython_version
        from distutils.version import LooseVersion
        if LooseVersion(cython_version) < LooseVersion('0.16'):
            raise Exception('Building pele requires Cython >= 0.16')

    except ImportError:
        pass

    flags = ['--fast-fail']
    if tofile.endswith('.cxx'):
        flags += ['--cplus']
        
    if _extra_flags:
        flags += _extra_flags

    try:
        try:
#            print("in dir " + os.getcwd())
            print(" ".join(['cython'] + flags + ["-o", tofile, fromfile]))
            r = subprocess.call(['cython'] + flags + ["-o", tofile, fromfile])
            if r != 0:
                raise Exception('Cython failed')
        except OSError:
            # There are ways of installing Cython that don't result in a cython
            # executable on the path, see gh-2397.
            r = subprocess.call([sys.executable, '-c',
                                 'import sys; from Cython.Compiler.Main import '
                                 'setuptools_main as main; sys.exit(main())'] + flags +
                                 ["-o", tofile, fromfile])
            if r != 0:
                raise Exception('Cython failed')
    except OSError:
        raise OSError('Cython needs to be installed')

def process_tempita_pyx(fromfile, tofile):
    import tempita
    with open(fromfile, "rb") as f:
        tmpl = f.read()
    pyxcontent = tempita.sub(tmpl)
    assert fromfile.endswith('.pyx.in')
    pyxfile = fromfile[:-len('.pyx.in')] + '.pyx'
    with open(pyxfile, "wb") as f:
        f.write(pyxcontent)
    process_pyx(pyxfile, tofile)

rules = {
    # fromext : function
    '.pyx' : process_pyx,
    '.pyx.in' : process_tempita_pyx
    }
#
# Hash db
#
def load_hashes(filename):
    # Return { filename : (sha1 of input, sha1 of output) }
    if os.path.isfile(filename):
        hashes = {}
        with open(filename, 'r') as f:
            for line in f:
                filename, inhash, outhash = line.split()
                hashes[filename] = (inhash, outhash)
    else:
        hashes = {}
    return hashes

def save_hashes(hash_db, filename):
    with open(filename, 'w') as f:
        for key, value in sorted(hash_db.items()):
            f.write("%s %s %s\n" % (key, value[0], value[1]))

def sha1_of_file(filename):
    h = hashlib.sha1()
    with open(filename, "rb") as f:
        h.update(f.read())
    return h.hexdigest()

#
# Main program
#

def normpath(path):
    path = path.replace(os.sep, '/')
    if path.startswith('./'):
        path = path[2:]
    return path

def get_hash(frompath, topath):
    from_hash = sha1_of_file(frompath)
    to_hash = sha1_of_file(topath) if os.path.exists(topath) else None
    return (from_hash, to_hash)

def process(path, fromfile, tofile, processor_function, hash_db):
    fullfrompath = os.path.join(path, fromfile)
    fulltopath = os.path.join(path, tofile)
    current_hash = get_hash(fullfrompath, fulltopath)
    if current_hash == hash_db.get(normpath(fullfrompath), None):
        print('%s has not changed' % fullfrompath)
        return

    orig_cwd = os.getcwd()
    try:
        os.chdir(path)
        print('Processing %s' % fullfrompath)
        processor_function(fromfile, tofile)
    finally:
        os.chdir(orig_cwd)
    # changed target file, recompute hash
    current_hash = get_hash(fullfrompath, fulltopath)
    # store hash in db
    hash_db[normpath(fullfrompath)] = current_hash


def find_process_files(root_dir):
    """loop through subdirectories finding pyx files and converting them"""
    hash_db = load_hashes(HASH_FILE)
    for cur_dir, dirs, files in os.walk(root_dir):
        for filename in files:
            for fromext, function in rules.items():
                if filename.endswith(fromext):
                    toext = ".c"
                    with open(os.path.join(cur_dir, filename), 'rb') as f:
                        data = f.read()
                        m = re.search(br"^\s*#\s*distutils:\s*language\s*=\s*c\+\+\s*$", data, re.I|re.M)
                        if m:
                            toext = ".cxx"
                    fromfile = filename
                    tofile = filename[:-len(fromext)] + toext
                    process(cur_dir, fromfile, tofile, function, hash_db)
                    save_hashes(hash_db, HASH_FILE)

def main():
    try:
        root_dir = sys.argv[1]
    except IndexError:
        root_dir = DEFAULT_ROOT

    if len(sys.argv) > 2:
        global _extra_flags
        for f in sys.argv[2:]:
            _extra_flags.append(f)
    find_process_files(root_dir)

if __name__ == '__main__':
    main()