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DESCRIPTION
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DESCRIPTION
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Package: CancerSubtypes
Type: Package
Title: Cancer subtypes identification, validation and visualization based on multiple genomic data sets
Version: 1.24.1
Date: 2023-01-09
Authors@R: c(
person("Yi", "Hsiao", email = "[email protected]", role = c("aut")),
person("Taosheng", "Xu", email = "[email protected]", role = c("aut", "cre")))
Depends: R (>= 4.0), sigclust, NMF
Imports: iClusterPlus, cluster, impute, limma, ConsensusClusterPlus,
grDevices, survival
Description: CancerSubtypes integrates the current common computational biology methods for cancer subtypes identification and provides a standardized framework for cancer subtype analysis based multi-omics data, such as gene expression, miRNA expression, DNA methylation and others.
License: GPL (>= 2)
Suggests: RUnit, BiocGenerics, knitr, RTCGA.mRNA, purrr, rmarkdown
VignetteBuilder: knitr
biocViews: Clustering, Software, Visualization, GeneExpression
URL: https://github.com/hsiaoyi0504/CancerSubtypes
BugReports: https://github.com/hsiaoyi0504/CancerSubtypes/issues
RoxygenNote: 7.1.1
git_url: https://github.com/hsiaoyi0504/CancerSubtypes
NeedsCompilation: no
Author: Yi Hsiao [aut], Taosheng Xu [aut, cre]
Maintainer: Yi Hsiao <[email protected]>