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  1. mushi mushi Public

    [mu]tation [s]pectrum [h]istory [i]nference

    Python 24 6

  2. mutyper mutyper Public

    Ancestral k-mer mutation types for SNP data

    Python 7 3

  3. gagp_mut_evol gagp_mut_evol Public

    Code for generating the main figures of Goldberg & Harris 2019 preprint

    R

  4. mushi-pipelines mushi-pipelines Public

    Data analysis pipelines for the mushi paper

    Jupyter Notebook

  5. elife_CAN1_paper elife_CAN1_paper Public

    code to generate plots for the 2021 eLife paper

    R

  6. mutator-epistasis-manuscript-2 mutator-epistasis-manuscript-2 Public

    HTML

Repositories

Showing 8 of 8 repositories
  • mutyh_human_pedigree Public

    Repository for code associated with Young & Beichman et al. "A maternal germline mutator phenotype in a family affected by heritable colorectal cancer"

    harrispopgen/mutyh_human_pedigree’s past year of commit activity
    R 0 0 0 0 Updated Sep 19, 2024
  • mammal_mutation_spectra Public

    Scripts used to generate Beichman, Robinson, Lin, Nigenda-Morales, Moreno-Estrada, & Harris. “Evolution of the mutation spectrum across a mammalian phylogeny”

    harrispopgen/mammal_mutation_spectra’s past year of commit activity
    R 0 0 0 0 Updated Aug 21, 2023
  • mutyper Public

    Ancestral k-mer mutation types for SNP data

    harrispopgen/mutyper’s past year of commit activity
    Python 7 MIT 3 6 0 Updated May 11, 2023
  • elife_CAN1_paper Public

    code to generate plots for the 2021 eLife paper

    harrispopgen/elife_CAN1_paper’s past year of commit activity
    R 0 BSD-3-Clause 0 0 0 Updated Apr 27, 2023
  • mutator-epistasis-manuscript-2 Public
    harrispopgen/mutator-epistasis-manuscript-2’s past year of commit activity
    HTML 0 CC-BY-4.0 0 0 0 Updated Apr 24, 2023
  • mushi Public

    [mu]tation [s]pectrum [h]istory [i]nference

    harrispopgen/mushi’s past year of commit activity
    Python 24 MIT 6 4 1 Updated Jan 31, 2022
  • mushi-pipelines Public

    Data analysis pipelines for the mushi paper

    harrispopgen/mushi-pipelines’s past year of commit activity
    Jupyter Notebook 0 MIT 0 1 0 Updated Mar 23, 2021
  • gagp_mut_evol Public

    Code for generating the main figures of Goldberg & Harris 2019 preprint

    harrispopgen/gagp_mut_evol’s past year of commit activity
    R 0 0 0 0 Updated Sep 24, 2020

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