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-  <meta name="author" content="Brock C. Christensen" />
   <meta name="author" content="Alexander J. Titus" />
   <meta name="author" content="Joshua J. Levy" />
+  <meta name="author" content="Casey S. Greene" />
+  <meta name="author" content="Brock C. Christensen" />
   <meta name="author" content="Daniel S. Himmelstein" />
-  <meta name="dcterms.date" content="2020-03-10" />
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@@ -81,39 +81,39 @@ <h1 class="title">Opportunities and obstacles for deep learning in biology and m
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 <p><link rel="stylesheet" href="https://use.fontawesome.com/releases/v5.7.2/css/all.css">
 <span class="banner lightred"><span class="fas fa-info-circle fa-lg"></span> <strong>Update Underway</strong><br>
-A published version of this manuscript from 04 April 2018, termed Version 1.0, is available at <a href="https://doi.org/10.1098/rsif.2017.0387" class="uri">https://doi.org/10.1098/rsif.2017.0387</a>.
-A new effort is underway to update the manuscript to a Version 2.0 that is current as of the first half of 2020.
+A published version of this manuscript from 04 April 2018, termed version 1.0, is available at <a href="https://doi.org/10.1098/rsif.2017.0387" class="uri">https://doi.org/10.1098/rsif.2017.0387</a>.
+A new effort is underway to update the manuscript to a version 2.0 that is current as of the first half of 2020.
 New authors and links to new sections are available in <a href="https://github.com/greenelab/deep-review/issues/959">GitHub Issue #959</a>.</span></p>
 <p><small><em>
 This manuscript
-(<a href="https://greenelab.github.io/deep-review/v/05b9080c1f27ba0d728e964ba2914e15a5b5d0e5/">permalink</a>)
+(<a href="https://greenelab.github.io/deep-review/v/5dcf0daef5149fb9d1d1fca11e90ce9cdf4152bc/">permalink</a>)
 was automatically generated
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-on March 10, 2020.
+from <a href="https://github.com/greenelab/deep-review/tree/5dcf0daef5149fb9d1d1fca11e90ce9cdf4152bc">greenelab/deep-review@5dcf0da</a>
+on March 16, 2020.
 </em></small></p>
 <h2 id="authors">Authors</h2>
-<h3 id="version-2.0-authors">Version 2.0 Authors</h3>
-<p><a href="https://orcid.org/0000-0001-8713-9213"><img src="images/orcid.svg" width="11" height="11" alt="ORCID icon" /></a>
-Casey S. Greene<sup>2.1,2.2⚄,†</sup>,
-<a href="https://orcid.org/0000-0003-3022-426X"><img src="images/orcid.svg" width="11" height="11" alt="ORCID icon" /></a>
-Brock C. Christensen<sup>2.3⚄</sup>,
-<a href="https://orcid.org/0000-0002-0145-9564"><img src="images/orcid.svg" width="11" height="11" alt="ORCID icon" /></a>
-Alexander J. Titus<sup>2.3⚄</sup>,
+<h3 id="version-2.0-authors">Version 2.0 authors</h3>
+<p><a href="https://orcid.org/0000-0002-0145-9564"><img src="images/orcid.svg" width="11" height="11" alt="ORCID icon" /></a>
+Alexander J. Titus<sup>2.1⚄</sup>,
 <a href="https://orcid.org/0000-0001-8050-1291"><img src="images/orcid.svg" width="11" height="11" alt="ORCID icon" /></a>
-Joshua J. Levy<sup>2.4⚄</sup>,
+Joshua J. Levy<sup>2.2⚄</sup>,
+<a href="https://orcid.org/0000-0001-8713-9213"><img src="images/orcid.svg" width="11" height="11" alt="ORCID icon" /></a>
+Casey S. Greene<sup>2.3,2.4⚄,†</sup>,
+<a href="https://orcid.org/0000-0003-3022-426X"><img src="images/orcid.svg" width="11" height="11" alt="ORCID icon" /></a>
+Brock C. Christensen<sup>2.1⚄</sup>,
 <a href="https://orcid.org/0000-0002-3012-7446"><img src="images/orcid.svg" width="11" height="11" alt="ORCID icon" /></a>
 Daniel S. Himmelstein<sup>2.5⚄</sup>,
 <a href="#version-1.0-authors">The Version 1.0 Deep Review Authors</a></p>
 <p><sup>⚄</sup> — Author order for version 2.0 is currently randomized <a href="https://github.com/greenelab/deep-review/pull/997">with each new build</a>.<br>
 <sup>†</sup> — To whom correspondence should be addressed: greenescientist@gmail.com (C.S.G.)</p>
 <p><small></p>
-<p>2.1. Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA<br>
-2.2. Childhood Cancer Data Lab, Alex’s Lemonade Stand Foundation, Philadelphia, PA<br>
-2.3. Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH<br>
-2.4. Program in Quantitative Biomedical Sciences, Geisel School of Medicine at Dartmouth, Lebanon, NH<br>
+<p>2.1. Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH<br>
+2.2. Program in Quantitative Biomedical Sciences, Geisel School of Medicine at Dartmouth, Lebanon, NH<br>
+2.3. Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA<br>
+2.4. Childhood Cancer Data Lab, Alex’s Lemonade Stand Foundation, Philadelphia, PA<br>
 2.5. Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America<br></p>
 <p></small></p>
-<h3 id="version-1.0-authors">Version 1.0 Authors</h3>
+<h3 id="version-1.0-authors">Version 1.0 authors</h3>
 <p><a href="https://orcid.org/0000-0002-5577-3516"><img src="images/orcid.svg" width="11" height="11" alt="ORCID icon" /></a>
 Travers Ching<sup>1.1,☯</sup>,
 <a href="https://orcid.org/0000-0002-3012-7446"><img src="images/orcid.svg" width="11" height="11" alt="ORCID icon" /></a>
@@ -1807,18 +1807,21 @@ <h3 id="continuous-collaborative-manuscript-drafting">Continuous collaborative m
 Contributions were handled through GitHub, with individuals submitting “pull requests” to suggest additions to the manuscript.
 This collaborative writing approach was later generalized into <a href="https://manubot.org/">Manubot</a> <span class="citation" data-cites="YuJbg3zO">[<a href="#ref-YuJbg3zO" role="doc-biblioref">599</a>]</span>.</p>
 <p>Manubot supports citations of persistent identifiers, such as DOIs, PubMed Central IDs, PubMed IDs, arXiv IDs, and URLs.
-This reduces one major barrier to collaboratively writing, which is syncing reference managers between participants.
-In addition, Manubot using continuous integration to build and deploy manuscripts.
+This reduces one major barrier to writing collaboratively, which is syncing reference managers between participants.
+In addition, Manubot uses continuous integration to build and deploy manuscripts.
 This allows for automated error checking of proposed changes to catch malformated citations and invalid syntax.
 Originally, the Deep Review used Travis CI for continuous integration, but in 2020 switched to GitHub Actions, which became the default for Manubot manuscripts.</p>
-<p>For version 1.0 of the Deep Review, author order was randomized as described in <a href="#version-1.0">Version 1.0</a> <span class="citation" data-cites="SqhJCztH">[<a href="#ref-SqhJCztH" role="doc-biblioref">600</a>]</span>.
+<p>For version 1.0 of the Deep Review, author order was randomized as described in <a href="#version-1.0">version 1.0</a> <span class="citation" data-cites="SqhJCztH">[<a href="#ref-SqhJCztH" role="doc-biblioref">600</a>]</span>.
 However, this was a one-time manual process.
 Starting with version 2.0, we began shuffling authors for every manuscript version.
 Manubot allowed us to automate this process, using the Git commit hash as a random seed to ensure reproducible ordering.</p>
 <h3 id="author-contributions">Author contributions</h3>
 <h4 id="version-2.0">Version 2.0</h4>
-<p>We continued using the open repository on the GitHub version control platform (<a href="https://github.com/greenelab/deep-review"><code>greenelab/deep-review</code></a>) <span class="citation" data-cites="yLr4pV4G">[<a href="#ref-yLr4pV4G" role="doc-biblioref">601</a>]</span>, which was established to write the Version 1.0 manuscript. Drafted one or more subsections: Brock C. Christensen,Alexander J. Titus,Joshua J. Levy. Drafted sub-sections, edited the manuscript, reviewed pull requests, and coordinated co-authors: Casey S. Greene. edited the manuscript, reviewed pull requests, and developed Manubot: Daniel S. Himmelstein.</p>
-<h5 id="version-2.0-competing-interests">Version 2.0 Competing Interests</h5>
+<p>We continued using the open repository on the GitHub version control platform (<a href="https://github.com/greenelab/deep-review"><code>greenelab/deep-review</code></a>) <span class="citation" data-cites="yLr4pV4G">[<a href="#ref-yLr4pV4G" role="doc-biblioref">601</a>]</span>, which was established to write the version 1.0 manuscript.</p>
+<p>Drafted one or more subsections: Alexander J. Titus, Joshua J. Levy, Brock C. Christensen.</p>
+<p>Drafted sub-sections, edited the manuscript, reviewed pull requests, and coordinated co-authors: Casey S. Greene.</p>
+<p>Edited the manuscript, reviewed pull requests, and developed Manubot: Daniel S. Himmelstein.</p>
+<h5 id="version-2.0-competing-interests">Version 2.0 competing interests</h5>
 <table>
 <thead>
 <tr class="header">
@@ -1829,24 +1832,24 @@ <h5 id="version-2.0-competing-interests">Version 2.0 Competing Interests</h5>
 </thead>
 <tbody>
 <tr class="odd">
-<td>Casey S. Greene</td>
+<td>Alexander J. Titus</td>
 <td>None</td>
-<td>2020-03-10</td>
+<td>2020-03-07</td>
 </tr>
 <tr class="even">
-<td>Brock C. Christensen</td>
+<td>Joshua J. Levy</td>
 <td>None</td>
-<td>2020-03-05</td>
+<td>2020-03-04</td>
 </tr>
 <tr class="odd">
-<td>Alexander J. Titus</td>
+<td>Casey S. Greene</td>
 <td>None</td>
-<td>2020-03-07</td>
+<td>2020-03-10</td>
 </tr>
 <tr class="even">
-<td>Joshua J. Levy</td>
+<td>Brock C. Christensen</td>
 <td>None</td>
-<td>2020-03-04</td>
+<td>2020-03-05</td>
 </tr>
 <tr class="odd">
 <td>Daniel S. Himmelstein</td>
@@ -1855,7 +1858,7 @@ <h5 id="version-2.0-competing-interests">Version 2.0 Competing Interests</h5>
 </tr>
 </tbody>
 </table>
-<h5 id="version-2.0-funding-statement">Version 2.0 Funding Statement</h5>
+<h5 id="version-2.0-funding-statement">Version 2.0 funding statement</h5>
 <p>We acknowledge funding from the Gordon and Betty Moore Foundation award GBMF4552 (C.S.G. and D.S.H.);
 the National Institutes of Health awards R01HG010067 (C.S.G. and D.S.H.), R01CA237170 (C.S.G), T32LM012204 (A.J.T.), R01CA216265 (B.C.C.);
 the Burroughs Wellcome Fund Big Data in the Life Sciences training grant at Dartmouth (J.L.L,);
@@ -1869,11 +1872,12 @@ <h4 id="version-1.0">Version 1.0</h4>
 approved the final manuscript draft; and agreed to be accountable in all aspects of the work.
 Individuals who did not contribute in all of these ways, but who did participate, are acknowledged below.
 We grouped authors into the following four classes of approximately equal contributions and randomly ordered authors within each contribution class.
-Drafted multiple sub-sections along with extensive editing, pull request reviews, or discussion: Travers Ching, Daniel S. Himmelstein, Brett K. Beaulieu-Jones, Alexandr A. Kalinin, Brian T. Do, Gregory P. Way, Enrico Ferrero, Paul-Michael Agapow, Michael Zietz, Michael M. Hoffman.
+Drafted multiple sub-sections along with extensive editing, pull request reviews, or discussion: Travers Ching, Brett K. Beaulieu-Jones, Alexandr A. Kalinin, Brian T. Do, Gregory P. Way, Enrico Ferrero, Paul-Michael Agapow, Michael Zietz, Michael M. Hoffman.
+Edited the manuscript, reviewed pull requests, and developed Manubot: Daniel S. Himmelstein.
 Drafted one or more sub-sections: Wei Xie, Gail L. Rosen, Benjamin J. Lengerich, Johnny Israeli, Jack Lanchantin, Stephen Woloszynek, Anne E. Carpenter, Avanti Shrikumar, Jinbo Xu, Evan M. Cofer, Christopher A. Lavender, Srinivas C. Turaga, Amr M. Alexandari, Zhiyong Lu.
 Drafted sub-sections, edited the manuscript, reviewed pull requests, and coordinated co-authors: Anthony Gitter, Casey S. Greene.
 Revised specific sub-sections or supervised drafting one or more sub-sections: David J. Harris, Dave DeCaprio, Yanjun Qi, Anshul Kundaje, Yifan Peng, Laura K. Wiley, Marwin H.S. Segler, Simina M. Boca, S. Joshua Swamidass, Austin Huang.</p>
-<h5 id="version-1.0-competing-interests">Version 1.0 Competing interests</h5>
+<h5 id="version-1.0-competing-interests">Version 1.0 competing interests</h5>
 <table>
 <thead>
 <tr class="header">
@@ -2065,7 +2069,7 @@ <h5 id="version-1.0-competing-interests">Version 1.0 Competing interests</h5>
 </tr>
 </tbody>
 </table>
-<h5 id="version-1.0-funding-statement">Version 1.0 Funding Statement</h5>
+<h5 id="version-1.0-funding-statement">Version 1.0 funding statement</h5>
 <p>We acknowledge funding from the Gordon and Betty Moore Foundation awards GBMF4552 (C.S.G. and D.S.H.) and GBMF4563 (D.J.H.);
 the Howard Hughes Medical Institute (S.C.T.);
 the National Institutes of Health awards DP2GM123485 (A.K.), P30CA051008 (S.M.B.), R01AI116794 (B.K.B.), R01GM089652 (A.E.C.), R01GM089753 (J.X.), R01LM012222 (S.J.S.), R01LM012482 (S.J.S.), R21CA220398 (S.M.B.), T32GM007753 (B.T.D.), T32HG000046 (G.P.W.), and U54AI117924 (A.G.);
diff --git a/manuscript.md b/manuscript.md
index 4202a9cc..7e0a63a9 100644
--- a/manuscript.md
+++ b/manuscript.md
@@ -1,14 +1,14 @@
 ---
 author-meta:
-- Casey S. Greene
-- Brock C. Christensen
 - Alexander J. Titus
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+- Casey S. Greene
+- Brock C. Christensen
 - Daniel S. Himmelstein
 bibliography:
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@@ -131,33 +131,33 @@ title: Opportunities and obstacles for deep learning in biology and medicine [up
 <link rel="stylesheet" href="https://use.fontawesome.com/releases/v5.7.2/css/all.css">
 [
 []{.fas .fa-info-circle .fa-lg} **Update Underway**<br>
-A published version of this manuscript from 04 April 2018, termed Version 1.0, is available at <https://doi.org/10.1098/rsif.2017.0387>.
-A new effort is underway to update the manuscript to a Version 2.0 that is current as of the first half of 2020.
+A published version of this manuscript from 04 April 2018, termed version 1.0, is available at <https://doi.org/10.1098/rsif.2017.0387>.
+A new effort is underway to update the manuscript to a version 2.0 that is current as of the first half of 2020.
 New authors and links to new sections are available in [GitHub Issue #959](https://github.com/greenelab/deep-review/issues/959).
 ]{.banner .lightred}
 
 
 <small><em>
 This manuscript
-([permalink](https://greenelab.github.io/deep-review/v/05b9080c1f27ba0d728e964ba2914e15a5b5d0e5/))
+([permalink](https://greenelab.github.io/deep-review/v/5dcf0daef5149fb9d1d1fca11e90ce9cdf4152bc/))
 was automatically generated
-from [greenelab/deep-review@05b9080](https://github.com/greenelab/deep-review/tree/05b9080c1f27ba0d728e964ba2914e15a5b5d0e5)
-on March 10, 2020.
+from [greenelab/deep-review@5dcf0da](https://github.com/greenelab/deep-review/tree/5dcf0daef5149fb9d1d1fca11e90ce9cdf4152bc)
+on March 16, 2020.
 </em></small>
 
 ## Authors
 
-### Version 2.0 Authors
+### Version 2.0 authors
 
 
-  [![ORCID icon](images/orcid.svg){height="11px" width="11px"}](https://orcid.org/0000-0001-8713-9213)
-    Casey S. Greene<sup>2.1,2.2⚄,†</sup>,
-  [![ORCID icon](images/orcid.svg){height="11px" width="11px"}](https://orcid.org/0000-0003-3022-426X)
-    Brock C. Christensen<sup>2.3⚄</sup>,
   [![ORCID icon](images/orcid.svg){height="11px" width="11px"}](https://orcid.org/0000-0002-0145-9564)
-    Alexander J. Titus<sup>2.3⚄</sup>,
+    Alexander J. Titus<sup>2.1⚄</sup>,
   [![ORCID icon](images/orcid.svg){height="11px" width="11px"}](https://orcid.org/0000-0001-8050-1291)
-    Joshua J. Levy<sup>2.4⚄</sup>,
+    Joshua J. Levy<sup>2.2⚄</sup>,
+  [![ORCID icon](images/orcid.svg){height="11px" width="11px"}](https://orcid.org/0000-0001-8713-9213)
+    Casey S. Greene<sup>2.3,2.4⚄,†</sup>,
+  [![ORCID icon](images/orcid.svg){height="11px" width="11px"}](https://orcid.org/0000-0003-3022-426X)
+    Brock C. Christensen<sup>2.1⚄</sup>,
   [![ORCID icon](images/orcid.svg){height="11px" width="11px"}](https://orcid.org/0000-0002-3012-7446)
     Daniel S. Himmelstein<sup>2.5⚄</sup>,
 [The Version 1.0 Deep Review Authors](#version-1.0-authors)
@@ -168,15 +168,15 @@ on March 10, 2020.
 <small>
 
 
-2.1. Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA<br>
-2.2. Childhood Cancer Data Lab, Alex's Lemonade Stand Foundation, Philadelphia, PA<br>
-2.3. Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH<br>
-2.4. Program in Quantitative Biomedical Sciences, Geisel School of Medicine at Dartmouth, Lebanon, NH<br>
+2.1. Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH<br>
+2.2. Program in Quantitative Biomedical Sciences, Geisel School of Medicine at Dartmouth, Lebanon, NH<br>
+2.3. Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA<br>
+2.4. Childhood Cancer Data Lab, Alex's Lemonade Stand Foundation, Philadelphia, PA<br>
 2.5. Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America<br>
 
 </small>
 
-### Version 1.0 Authors
+### Version 1.0 authors
 
   [![ORCID icon](images/orcid.svg){height="11px" width="11px"}](https://orcid.org/0000-0002-5577-3516)
     Travers Ching<sup>1.1,☯</sup>,
@@ -2098,12 +2098,12 @@ Contributions were handled through GitHub, with individuals submitting "pull req
 This collaborative writing approach was later generalized into [Manubot](https://manubot.org/) [@doi:10.1371/journal.pcbi.1007128].
 
 Manubot supports citations of persistent identifiers, such as DOIs, PubMed Central IDs, PubMed IDs, arXiv IDs, and URLs.
-This reduces one major barrier to collaboratively writing, which is syncing reference managers between participants.
-In addition, Manubot using continuous integration to build and deploy manuscripts.
+This reduces one major barrier to writing collaboratively, which is syncing reference managers between participants.
+In addition, Manubot uses continuous integration to build and deploy manuscripts.
 This allows for automated error checking of proposed changes to catch malformated citations and invalid syntax.
 Originally, the Deep Review used Travis CI for continuous integration, but in 2020 switched to GitHub Actions, which became the default for Manubot manuscripts.
 
-For version 1.0 of the Deep Review, author order was randomized as described in [Version 1.0] [@tag:techblog-perkel].
+For version 1.0 of the Deep Review, author order was randomized as described in [version 1.0] [@tag:techblog-perkel].
 However, this was a one-time manual process.
 Starting with version 2.0, we began shuffling authors for every manuscript version.
 Manubot allowed us to automate this process, using the Git commit hash as a random seed to ensure reproducible ordering.
@@ -2112,19 +2112,26 @@ Manubot allowed us to automate this process, using the Git commit hash as a rand
 
 #### Version 2.0
 
-We continued using the open repository on the GitHub version control platform ([`greenelab/deep-review`](https://github.com/greenelab/deep-review)) [@url:https://github.com/greenelab/deep-review], which was established to write the Version 1.0 manuscript. Drafted one or more subsections: Brock C. Christensen,Alexander J. Titus,Joshua J. Levy. Drafted sub-sections, edited the manuscript, reviewed pull requests, and coordinated co-authors: Casey S. Greene. edited the manuscript, reviewed pull requests, and developed Manubot: Daniel S. Himmelstein. 
+We continued using the open repository on the GitHub version control platform ([`greenelab/deep-review`](https://github.com/greenelab/deep-review)) [@url:https://github.com/greenelab/deep-review], which was established to write the version 1.0 manuscript.
+
+  Drafted one or more subsections: Alexander J. Titus, Joshua J. Levy, Brock C. Christensen. 
+
+  Drafted sub-sections, edited the manuscript, reviewed pull requests, and coordinated co-authors: Casey S. Greene. 
+
+  Edited the manuscript, reviewed pull requests, and developed Manubot: Daniel S. Himmelstein. 
+
 
-##### Version 2.0 Competing Interests
+##### Version 2.0 competing interests
 
 |Author|Competing Interests|Last Reviewed|
 |---|---|---|
-|Casey S. Greene|None|2020-03-10|
-|Brock C. Christensen|None|2020-03-05|
 |Alexander J. Titus|None|2020-03-07|
 |Joshua J. Levy|None|2020-03-04|
+|Casey S. Greene|None|2020-03-10|
+|Brock C. Christensen|None|2020-03-05|
 |Daniel S. Himmelstein|None|2020-03-10|
 
-##### Version 2.0 Funding Statement
+##### Version 2.0 funding statement
 
 We acknowledge funding from the Gordon and Betty Moore Foundation award GBMF4552 (C.S.G. and D.S.H.);
 the National Institutes of Health awards R01HG010067 (C.S.G. and D.S.H.), R01CA237170 (C.S.G), T32LM012204 (A.J.T.), R01CA216265 (B.C.C.);
@@ -2141,13 +2148,13 @@ drafted the manuscript or provided substantial critical revisions;
 approved the final manuscript draft; and agreed to be accountable in all aspects of the work.
 Individuals who did not contribute in all of these ways, but who did participate, are acknowledged below.
 We grouped authors into the following four classes of approximately equal contributions and randomly ordered authors within each contribution class.
-Drafted multiple sub-sections along with extensive editing, pull request reviews, or discussion: Travers Ching, Daniel S. Himmelstein, Brett K. Beaulieu-Jones, Alexandr A. Kalinin, Brian T. Do, Gregory P. Way, Enrico Ferrero, Paul-Michael Agapow, Michael Zietz, Michael M. Hoffman.
+Drafted multiple sub-sections along with extensive editing, pull request reviews, or discussion: Travers Ching, Brett K. Beaulieu-Jones, Alexandr A. Kalinin, Brian T. Do, Gregory P. Way, Enrico Ferrero, Paul-Michael Agapow, Michael Zietz, Michael M. Hoffman.
+Edited the manuscript, reviewed pull requests, and developed Manubot: Daniel S. Himmelstein.
 Drafted one or more sub-sections: Wei Xie, Gail L. Rosen, Benjamin J. Lengerich, Johnny Israeli, Jack Lanchantin, Stephen Woloszynek, Anne E. Carpenter, Avanti Shrikumar, Jinbo Xu, Evan M. Cofer, Christopher A. Lavender, Srinivas C. Turaga, Amr M. Alexandari, Zhiyong Lu.
 Drafted sub-sections, edited the manuscript, reviewed pull requests, and coordinated co-authors: Anthony Gitter, Casey S. Greene.
 Revised specific sub-sections or supervised drafting one or more sub-sections: David J. Harris, Dave DeCaprio, Yanjun Qi, Anshul Kundaje, Yifan Peng, Laura K. Wiley, Marwin H.S. Segler, Simina M. Boca, S. Joshua Swamidass, Austin Huang.
 
-##### Version 1.0 Competing interests
-
+##### Version 1.0 competing interests
 
 |Author|Competing Interests|Last Reviewed|
 |---|---|---|
@@ -2188,7 +2195,7 @@ Revised specific sub-sections or supervised drafting one or more sub-sections: D
 |Anthony Gitter|None|2017-05-26|
 |Casey S. Greene|None|2017-05-26|
 
-##### Version 1.0 Funding Statement
+##### Version 1.0 funding statement
 
 We acknowledge funding from the Gordon and Betty Moore Foundation awards GBMF4552 (C.S.G. and D.S.H.) and GBMF4563 (D.J.H.);
 the Howard Hughes Medical Institute (S.C.T.);
diff --git a/manuscript.pdf b/manuscript.pdf
index 20a7c53f..0d1eb323 100644
Binary files a/manuscript.pdf and b/manuscript.pdf differ
diff --git a/variables.json b/variables.json
index 339d9b14..ea6c7a35 100644
--- a/variables.json
+++ b/variables.json
@@ -12,15 +12,15 @@
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-      "Casey S. Greene",
-      "Brock C. Christensen",
       "Alexander J. Titus",
       "Joshua J. Levy",
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@@ -31,85 +31,85 @@
     "manubot-clear-requests-cache": false
   },
   "manubot": {
-    "date": "March 10, 2020",
+    "date": "March 16, 2020",
     "authors": [
       {
-        "github": "cgreene",
-        "name": "Casey S. Greene",
-        "orcid": "0000-0001-8713-9213",
-        "email": "greenescientist@gmail.com",
+        "github": "AlexanderTitus",
+        "name": "Alexander J. Titus",
+        "orcid": "0000-0002-0145-9564",
+        "email": "alexander.j.titus@dartmouth.edu",
         "affiliations": [
-          "Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA",
-          "Childhood Cancer Data Lab, Alex's Lemonade Stand Foundation, Philadelphia, PA"
+          "Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH"
         ],
-        "funders": "GBMF GBMF4552, NIH R01HG010067 & R01CA237170, ALSF CCDL",
-        "symbol_str": "†",
-        "v1": "Drafted sub-sections, edited the manuscript, reviewed pull requests, and coordinated co-authors",
-        "v2": "Drafted sub-sections, edited the manuscript, reviewed pull requests, and coordinated co-authors",
+        "funders": "NIH T32LM012204",
+        "v1": "",
+        "v2": "Drafted one or more subsections",
         "coi": {
           "string": "None",
-          "lastapproved": "2020-03-10"
+          "lastapproved": "2020-03-07"
         },
         "affiliation_numbers": [
-          1,
-          2
+          1
         ]
       },
       {
-        "github": "brockclarke",
-        "name": "Brock C. Christensen",
-        "orcid": "0000-0003-3022-426X",
-        "email": "brock.christensen@dartmouth.edu",
+        "github": "jlevy44",
+        "name": "Joshua J. Levy",
+        "orcid": "0000-0001-8050-1291",
+        "email": "joshua.j.levy.gr@dartmouth.edu",
         "affiliations": [
-          "Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH"
+          "Program in Quantitative Biomedical Sciences, Geisel School of Medicine at Dartmouth, Lebanon, NH"
         ],
-        "funders": "NIH R01CA216265, Dartmouth College Neukom Institute for Computational Science CompX award",
+        "funders": "Burroughs Wellcome Fund Big Data in the Life Sciences training grant at Dartmouth",
         "v1": "",
         "v2": "Drafted one or more subsections",
         "coi": {
           "string": "None",
-          "lastapproved": "2020-03-05"
+          "lastapproved": "2020-03-04"
         },
         "affiliation_numbers": [
-          3
+          2
         ]
       },
       {
-        "github": "AlexanderTitus",
-        "name": "Alexander J. Titus",
-        "orcid": "0000-0002-0145-9564",
-        "email": "alexander.j.titus@dartmouth.edu",
+        "github": "cgreene",
+        "name": "Casey S. Greene",
+        "orcid": "0000-0001-8713-9213",
+        "email": "greenescientist@gmail.com",
         "affiliations": [
-          "Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH"
+          "Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA",
+          "Childhood Cancer Data Lab, Alex's Lemonade Stand Foundation, Philadelphia, PA"
         ],
-        "funders": "NIH T32LM012204",
-        "v1": "",
-        "v2": "Drafted one or more subsections",
+        "funders": "GBMF GBMF4552, NIH R01HG010067 & R01CA237170, ALSF CCDL",
+        "symbol_str": "†",
+        "v1": "Drafted sub-sections, edited the manuscript, reviewed pull requests, and coordinated co-authors",
+        "v2": "Drafted sub-sections, edited the manuscript, reviewed pull requests, and coordinated co-authors",
         "coi": {
           "string": "None",
-          "lastapproved": "2020-03-07"
+          "lastapproved": "2020-03-10"
         },
         "affiliation_numbers": [
-          3
+          3,
+          4
         ]
       },
       {
-        "github": "jlevy44",
-        "name": "Joshua J. Levy",
-        "orcid": "0000-0001-8050-1291",
-        "email": "joshua.j.levy.gr@dartmouth.edu",
+        "github": "brockclarke",
+        "name": "Brock C. Christensen",
+        "orcid": "0000-0003-3022-426X",
+        "email": "brock.christensen@dartmouth.edu",
         "affiliations": [
-          "Program in Quantitative Biomedical Sciences, Geisel School of Medicine at Dartmouth, Lebanon, NH"
+          "Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH"
         ],
-        "funders": "Burroughs Wellcome Fund Big Data in the Life Sciences training grant at Dartmouth",
+        "funders": "NIH R01CA216265, Dartmouth College Neukom Institute for Computational Science CompX award",
         "v1": "",
         "v2": "Drafted one or more subsections",
         "coi": {
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-          "lastapproved": "2020-03-04"
+          "lastapproved": "2020-03-05"
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       {
@@ -121,8 +121,8 @@
           "Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America"
         ],
         "funders": "G-2018-11163 and GBMF4552",
-        "v1": "edited the manuscript, reviewed pull requests, and developed Manubot",
-        "v2": "edited the manuscript, reviewed pull requests, and developed Manubot",
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@@ -134,19 +134,19 @@
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     "affiliations": [
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-        "affiliation": "Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA",
+        "affiliation": "Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH",
         "affiliation_number": 1
       },
       {
-        "affiliation": "Childhood Cancer Data Lab, Alex's Lemonade Stand Foundation, Philadelphia, PA",
+        "affiliation": "Program in Quantitative Biomedical Sciences, Geisel School of Medicine at Dartmouth, Lebanon, NH",
         "affiliation_number": 2
       },
       {
-        "affiliation": "Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH",
+        "affiliation": "Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA",
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       {
-        "affiliation": "Program in Quantitative Biomedical Sciences, Geisel School of Medicine at Dartmouth, Lebanon, NH",
+        "affiliation": "Childhood Cancer Data Lab, Alex's Lemonade Stand Foundation, Philadelphia, PA",
         "affiliation_number": 4
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       {
@@ -159,20 +159,20 @@
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