setup.py

import os
import re
from setuptools import setup, find_packages

with open("deTiN/__about__.py") as reader:
    __version__ = re.search(
        r"__version__ ?= ?[\'\"]([\w.]+)[\'\"]", reader.read()
    ).group(1)


# Setup information
setup(
    name="deTiN",
    version=__version__,
    packages=find_packages(),
    description="Somatic analysis toolkit for dealing with tumor in normal contamination",
    author="Broad Institute - Cancer Genome Computational Analysis",
    author_email="amaro@broadinstitute.org",
    long_description="see publication",
    entry_points={"console_scripts": ["deTiN = deTiN.deTiN:main"]},
    install_requires=[
        "numpy",
        "matplotlib==3.1.3",
        "pandas==1.0.0",
        "scipy",
        "sklearn",
        "argparse",
        "random2",
    ],
    classifiers=[
        "Programming Language :: Python :: 2",
        "Intended Audience :: Science/Research",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
    ],
)