NAMESPACE

# Generated by roxygen2: do not edit by hand

export(alluvialMat)
export(aucMat)
export(cluster2pattern)
export(clusterPlotR)
export(correlateR)
export(geneMatchR)
export(getTSNE)
export(getUMAP)
export(intersectoR)
export(multivariateAnalysisR)
export(pdVolcano)
export(plotConfidenceIntervals)
export(plotVolcano)
export(projectR)
export(projectionDriveR)
export(rotatoR)
exportClasses(cluster2pattern)
exportClasses(correlateR)
exportClasses(rotatoR)
import(MatrixModels)
import(RColorBrewer)
import(SingleCellExperiment)
import(cluster)
import(dplyr)
import(fgsea)
import(ggalluvial)
import(ggplot2)
import(limma)
import(msigdbr)
import(reshape2)
import(scales, except = viridis_pal)
import(tsne)
import(umap)
import(viridis)
importFrom(Matrix,as.matrix)
importFrom(NMF,fcnnls)
importFrom(ROCR,performance)
importFrom(ROCR,prediction)
importFrom(cowplot,plot_grid)
importFrom(dplyr,"%>%")
importFrom(dplyr,dense_rank)
importFrom(dplyr,mutate)
importFrom(ggrepel,geom_label_repel)
importFrom(ggrepel,geom_text_repel)
importFrom(grDevices,colorRampPalette)
importFrom(methods,callNextMethod)
importFrom(scales,squish)
importFrom(stats,cor)
importFrom(stats,cutree)
importFrom(stats,hclust)
importFrom(stats,kmeans)
importFrom(stats,model.matrix)
importFrom(stats,prcomp)
importFrom(stats,var)