From 778cdeeb075b0093f1be0d68af9b1d924e9ad7d2 Mon Sep 17 00:00:00 2001 From: Raymond Lee Date: Wed, 20 Sep 2023 15:40:17 -0700 Subject: [PATCH 1/2] Created six axomemal microtubule doublet terms. #26148 --- src/ontology/go-edit.obo | 68 ++++++++++++++++++++++++++++++++++++++++ 1 file changed, 68 insertions(+) diff --git a/src/ontology/go-edit.obo b/src/ontology/go-edit.obo index c567cb733d..546948ea30 100644 --- a/src/ontology/go-edit.obo +++ b/src/ontology/go-edit.obo @@ -458563,6 +458563,74 @@ property_value: term_tracker_item "https://github.com/geneontology/go-ontology/i created_by: rynl creation_date: 2023-09-18T20:55:06Z +[Term] +id: GO:0160110 +name: axonemal microtubule doublet inner sheath +namespace: cellular_component +def: "A structural network of microtubule inner proteins (MIPs) located inside the lumens of the A and B tubules of the axonemal microtuble doublet that helps stabilize the doublet microtubule." [GOC:krc, PMID:29430673, PMID:37295417] +is_a: GO:0110165 ! cellular anatomical entity +relationship: part_of GO:0097545 ! axonemal outer doublet +property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26148" xsd:anyURI +created_by: rynl +creation_date: 2023-09-19T17:41:57Z + +[Term] +id: GO:0160111 +name: axonemal A tubule inner sheath +namespace: cellular_component +def: "A structural network of microtubule inner proteins (MIPs) located inside the lumen of the A tubule of the axonemal microtubule doublet that helps stabilize the A tubule." [GOC:krc, PMID:29430673, PMID:37295417] +is_a: GO:0110165 ! cellular anatomical entity +relationship: part_of GO:0097649 ! A axonemal microtubule +relationship: part_of GO:0160110 ! axonemal microtubule doublet inner sheath +property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26148" xsd:string +created_by: rynl +creation_date: 2023-09-19T17:50:09Z + +[Term] +id: GO:0160112 +name: axonemal B tubule inner sheath +namespace: cellular_component +def: "A structural network of microtubule inner proteins (MIPs) located inside the lumen of the B tubule of the axonemal microtubule doublet that helps stabilize the B tubule." [GOC:krc, PMID:29430673, PMID:37295417] +is_a: GO:0110165 ! cellular anatomical entity +relationship: part_of GO:0097649 ! A axonemal microtubule +relationship: part_of GO:0160110 ! axonemal microtubule doublet inner sheath +property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26148" xsd:anyURI +created_by: rynl +creation_date: 2023-09-19T18:06:17Z + +[Term] +id: GO:0160113 +name: axonemal microtubule doublet inner junction +namespace: cellular_component +def: "The structure which joins the B10 protofilament of the B tubule to the A1 protofilament of the A tubule within an axonemal microtubule doublet." [GOC:krc, PMID:29430673, PMID:37295417] +is_a: GO:0110165 ! cellular anatomical entity +relationship: part_of GO:0097545 ! axonemal outer doublet +property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26148" xsd:anyURI +created_by: rynl +creation_date: 2023-09-20T22:22:35Z + +[Term] +id: GO:0160114 +name: axonemal microtubule doublet outer junction +namespace: cellular_component +def: "The structure which joins the B1 protofilament of the B tubule to the A10 and A11 protofilaments of the A tubule within an axonemal microtubule doublet." [GOC:krc, PMID:29430673, PMID:37295417] +is_a: GO:0110165 ! cellular anatomical entity +relationship: part_of GO:0097545 ! axonemal outer doublet +property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26148" xsd:anyURI +created_by: rynl +creation_date: 2023-09-20T22:26:23Z + +[Term] +id: GO:0160115 +name: axonemal microtubule doublet ribbon +namespace: cellular_component +def: "The 3 protofilaments A11, A12, and A13 of the A tubule along with associated inner sheath microtuble inner proteins (MIPs), either in the lumen of the A tubule or of the B tubule, which stabilize these three filiments within the axonemal doublet microtubule. The ribbon protofilaments separate the lumens of the A and B tubules." [GOC:krc, PMID:1262413, PMID:29430673] +is_a: GO:0110165 ! cellular anatomical entity +relationship: part_of GO:0097545 ! axonemal outer doublet +property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26148" xsd:anyURI +created_by: rynl +creation_date: 2023-09-20T22:28:52Z + [Term] id: GO:0170001 name: ergothioneine transmembrane transporter activity From c5bfaa5b0460a91cc7433cdd5205e0ce7a0edae4 Mon Sep 17 00:00:00 2001 From: Raymond Lee Date: Wed, 20 Sep 2023 16:00:47 -0700 Subject: [PATCH 2/2] Fixed URI. #26148 --- src/ontology/go-edit.obo | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/ontology/go-edit.obo b/src/ontology/go-edit.obo index 546948ea30..82fd8a54d7 100644 --- a/src/ontology/go-edit.obo +++ b/src/ontology/go-edit.obo @@ -458582,7 +458582,7 @@ def: "A structural network of microtubule inner proteins (MIPs) located inside t is_a: GO:0110165 ! cellular anatomical entity relationship: part_of GO:0097649 ! A axonemal microtubule relationship: part_of GO:0160110 ! axonemal microtubule doublet inner sheath -property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26148" xsd:string +property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26148" xsd:anyURI created_by: rynl creation_date: 2023-09-19T17:50:09Z