From a06ab619a6bd3f1ecca56f8ce241f3f8cf3bab48 Mon Sep 17 00:00:00 2001 From: pgaudet Date: Thu, 5 Dec 2024 17:01:48 +0100 Subject: [PATCH] Update download-ontology.md --- _docs/download-ontology.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/_docs/download-ontology.md b/_docs/download-ontology.md index aaf4af51..edcda4e2 100644 --- a/_docs/download-ontology.md +++ b/_docs/download-ontology.md @@ -12,7 +12,7 @@ redirect_from: Files are available in the [OBO](https://owlcollab.github.io/oboformat/doc/obo-syntax.html){:target="blank"}, [OWL](https://www.w3.org/TR/owl2-overview/){:target="blank"} and JSON formats. # Gene ontology files -Three versions of the ontology are available, as described below. +Three versions of the ontology are available as described below. | File Name | Description | Download
.obo file | Download
.json file | Download
.owl file | |-------|--------------|-------------|-------------|-------------| @@ -21,7 +21,7 @@ Three versions of the ontology are available, as described below. |**go-plus** | This is the fully axiomatised version of the GO. It includes cross-ontology relationships (axioms) and imports additional required ontologies including [ChEBI](https://www.ebi.ac.uk/chebi/){:target="blank"}, [Cell Ontology](http://www.obofoundry.org/ontology/cl.html){:target="blank"} and [Uberon](http://uberon.github.io/){:target="blank"}. It also includes to complete set of relationship types including some not present in **go**. This version is only available in [OWL](https://www.w3.org/OWL/){:target="blank"} format. | NA | NA | [go-plus.owl file](https://purl.obolibrary.org/obo/go/extensions/go-plus.owl){:target="blank"} | -### GO subset files +## GO subset files GO subsets (also known as GO slims) are condensed versions of the GO containing a reduced number of terms. They are specified by tags within the ontology that indicate if a given term is a member of a particular subset. GO subsets are used to provide a broad overview of the range of functions and processes relevant to a gene or a goup of genes. More information and links for downloading subsets be found on the [Guide to GO subsets](/docs/go-subset-guide/) page. ## Cross-references of GO to other classification systems