v0.5.1 release

1. refactor the code we can generate build without AGC lib, useful for non-standard-linux platform for command line / Rust lib only usage. (For example, using the code on a M1/M2 MacOS)
2. code linting
3. pgr-pbundle-decomp can save previous constructed bundle decomposition and re-use them
4. remove WFA2 dependence

Minor tweaks, add fast coverage comparisons, and alignment to compute offset

1. addition functionality on pgr-pbundle-bed2svg
2. add pgr-compare-cov, pgr-compare-cov2
3. add pgr-pbundle-bed2offset.rs
4. pgr-pbundle-decomp now support projecting new sequence onto a MAP-Graph built from different set of sequences
5. support query fasta files in pgr-query
6. fix a graph traversal bug in pgr-db/src/graph_utils.rs
7. fix a bug in the sequence reconstruction
   8 bump the Docker for workstation to new version of python

v0.4.0

Provide command line tools and minor modifications of the principal MAG-graph generation algorithm.

v0.3.6

In v0.3.4, we will missing one principle bundle at the beginner. This is fixed but v0.3.5 but I forget to update the version string. To avoid confusion, we fix it in v0.3.6.

v0.3.4

frozen release before submitting to a preprint archive