diff --git a/doc/source/user_guide/gembase_convention.rst b/doc/source/user_guide/gembase_convention.rst index d57fd242..3a7fe1f9 100644 --- a/doc/source/user_guide/gembase_convention.rst +++ b/doc/source/user_guide/gembase_convention.rst @@ -64,6 +64,13 @@ This input file contains 3 replicons: PlasmidA (which 2 first protein identifier ChromosomeA (which 2 first protein identifiers are 0001 and 0020) and NC_001548 (which first protein identifier is 0015). MacSyFinder search results will thus be reported for each of these three replicons. +.. warning:: + + This `gembase` format is old and not compliant with the `gembase` format produced by + `PanACoTA <https://github.com/gem-pasteur/PanACoTA>`_. + The support of the new `gembase` format is in the road map. + + .. _topology-files: **************