pyproject.toml

[build-system]
requires = ["setuptools"]
build-backend = "setuptools.build_meta"

[project]
name = "PanACoTA"
authors = [
    {name = "Amandine PERRIN", email = "amandine.perrin@pasteur.fr"},
]
description="Large scale comparative genomics tools: annotate genomes, do pangenome, core/persistent genome, align core/persistent families, infer phylogenetic tree."
requires-python = ">=3.7"
keywords = ["persistent genome", "pangenome", "bacteria", "Bioinformatics", "Comparative genomics",
            "core genome", "phylogenetic tree", "alignment", "families"]
license = {text = "aGPL v3"}
classifiers = [
    "Environment :: Console",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: GNU Affero General Public License v3",
    "Programming Language :: Python :: 3",
    "Operating System :: OS Independent",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
]
dynamic = ["version", "readme", "dependencies", "optional-dependencies"]

[tool.setuptools.dynamic]
version = {attr = "PanACoTA.__init__.__version__"}
readme = {file = ["README.md"]}
dependencies = {file = ["requirements.txt"]}
optional-dependencies = {dev = {file = ["requirements-dev.txt"]}}

[project.scripts]
PanACoTA = "PanACoTA.bin.run_panacota:main"

[tool.setuptools]
packages = ["PanACoTA"]

[project.urls]
homepage = "https://github.com/gem-pasteur/PanACoTA"
documentation = "https://aperrin.pages.pasteur.fr/pipeline_annotation/html-doc/"