diff --git a/HISTORY.md b/HISTORY.md index 6975ee0..45c863b 100644 --- a/HISTORY.md +++ b/HISTORY.md @@ -1,16 +1,21 @@ -======= -History -======= +# History -0.3.0 (2023-08-18) ------------------- +# 0.3.2 (2023-09-20) + +* Changes `Orffinder` to `Genefinder` to support `pyrodigal` v3. +* Updates dependency to `pyrodigal >=v3`. + +# 0.3.1 (2023-09-01) + +* Minor release to fix an error with dnaapler all #38 thanks @samnooij + +# 0.3.0 (2023-08-18) * `dnaapler all` subcommand added thanks @alexweisberg * `dnaapler all` implements `--ignore` to ignore some contigs -0.2.0 (2023-08-08) ------------------- +# 0.2.0 (2023-08-08) * `dnaapler nearest` subcommand added * `dnaapler bulk` subcommand added @@ -18,8 +23,7 @@ History * Adds `-e` parameter to vary BLAST evalue if desired * Adds `-a` autocomplete parameter if user wants to reorient sequences with mystery or nearest methods in case the BLAST based method fails -0.1.0 (2022-10-12) ------------------- +# 0.1.0 (June 2023) * Completely overhauled * First stable released with pypi and conda @@ -30,7 +34,6 @@ History * `dnaapler plasmid` added -0.0.1 (2022-10-12) ------------------- +# 0.0.1 (2022-10-12) * First release (conda only `conda install -c gbouras dnaapler`) diff --git a/pyproject.toml b/pyproject.toml index ca887ed..4f1fa56 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "dnaapler" -version = "0.3.1" # change VERSION too +version = "0.3.2" # change VERSION too description = "Reorients assembled microbial sequences" authors = ["George Bouras "] license = "MIT"