update pre-release builds for VRS and cat-VRS

ga4gh · Nov 27, 2024 · e9abeb1 · e9abeb1
1 parent cbded44
commit e9abeb1
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Showing 12 changed files with 20 additions and 20 deletions.
diff --git a/schema/va-spec/base/cohort-allele-frequency-study-result-profile-source.yaml b/schema/va-spec/base/cohort-allele-frequency-study-result-profile-source.yaml
@@ -10,8 +10,8 @@ imports:
 
 namespaces:
   gks.core: /ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.2/json/
-  vrs: /ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/
-  cat-vrs: /ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.1/json/
+  vrs: /ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/
+  cat-vrs: /ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.2/json/
 
 $defs:
   CohortAlleleFrequencyStudyResult:

diff --git a/schema/va-spec/base/experimental-functional-impact-study-result-profile-source.yaml b/schema/va-spec/base/experimental-functional-impact-study-result-profile-source.yaml
@@ -10,7 +10,7 @@ imports:
 
 namespaces:
   gks.core: /ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.2/json/
-  vrs: /ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/
+  vrs: /ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/
 
 $defs:
   ExperimentalVariantFunctionalImpactStudyResult:  

diff --git a/schema/va-spec/base/json/CohortAlleleFrequencyStudyResult b/schema/va-spec/base/json/CohortAlleleFrequencyStudyResult
@@ -90,7 +90,7 @@
                "$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.1/json/iriReference"
             },
             {
-               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/Allele"
+               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/Allele"
             }
          ],
          "description": "The Allele for which frequency results are reported.",

diff --git a/schema/va-spec/base/json/ExperimentalVariantFunctionalImpactProposition b/schema/va-spec/base/json/ExperimentalVariantFunctionalImpactProposition
@@ -39,13 +39,13 @@
       "subjectVariant": {
          "oneOf": [
             {
-               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.1/json/CategoricalVariant"
+               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.2/json/CategoricalVariant"
             },
             {
                "$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.1/json/iriReference"
             },
             {
-               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/MolecularVariation"
+               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/MolecularVariation"
             }
          ],
          "description": "A variant that is the subject of the Proposition.",

diff --git a/schema/va-spec/base/json/ExperimentalVariantFunctionalImpactStudyResult b/schema/va-spec/base/json/ExperimentalVariantFunctionalImpactStudyResult
@@ -73,7 +73,7 @@
                "$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.1/json/iriReference"
             },
             {
-               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/MolecularVariation"
+               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/MolecularVariation"
             }
          ],
          "description": "The genetic variant for which a functional impact score is generated.",

diff --git a/schema/va-spec/base/json/VariantDiagnosticProposition b/schema/va-spec/base/json/VariantDiagnosticProposition
@@ -39,13 +39,13 @@
       "subjectVariant": {
          "oneOf": [
             {
-               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.1/json/CategoricalVariant"
+               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.2/json/CategoricalVariant"
             },
             {
                "$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.1/json/iriReference"
             },
             {
-               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/MolecularVariation"
+               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/MolecularVariation"
             }
          ],
          "description": "A variant that is the subject of the Proposition.",

diff --git a/schema/va-spec/base/json/VariantOncogenicityProposition b/schema/va-spec/base/json/VariantOncogenicityProposition
@@ -39,13 +39,13 @@
       "subjectVariant": {
          "oneOf": [
             {
-               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.1/json/CategoricalVariant"
+               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.2/json/CategoricalVariant"
             },
             {
                "$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.1/json/iriReference"
             },
             {
-               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/MolecularVariation"
+               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/MolecularVariation"
             }
          ],
          "description": "A variant that is the subject of the Proposition.",

diff --git a/schema/va-spec/base/json/VariantPathogenicityProposition b/schema/va-spec/base/json/VariantPathogenicityProposition
@@ -39,13 +39,13 @@
       "subjectVariant": {
          "oneOf": [
             {
-               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.1/json/CategoricalVariant"
+               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.2/json/CategoricalVariant"
             },
             {
                "$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.1/json/iriReference"
             },
             {
-               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/MolecularVariation"
+               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/MolecularVariation"
             }
          ],
          "description": "A variant that is the subject of the Proposition.",

diff --git a/schema/va-spec/base/json/VariantPrognosticProposition b/schema/va-spec/base/json/VariantPrognosticProposition
@@ -39,13 +39,13 @@
       "subjectVariant": {
          "oneOf": [
             {
-               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.1/json/CategoricalVariant"
+               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.2/json/CategoricalVariant"
             },
             {
                "$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.1/json/iriReference"
             },
             {
-               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/MolecularVariation"
+               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/MolecularVariation"
             }
          ],
          "description": "A variant that is the subject of the Proposition.",

diff --git a/schema/va-spec/base/json/VariantTherapeuticResponseProposition b/schema/va-spec/base/json/VariantTherapeuticResponseProposition
@@ -39,13 +39,13 @@
       "subjectVariant": {
          "oneOf": [
             {
-               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.1/json/CategoricalVariant"
+               "$ref": "/ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.2/json/CategoricalVariant"
             },
             {
                "$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.1/json/iriReference"
             },
             {
-               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/MolecularVariation"
+               "$ref": "/ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/MolecularVariation"
             }
          ],
          "description": "A variant that is the subject of the Proposition.",

diff --git a/schema/va-spec/base/va-core-source.yaml b/schema/va-spec/base/va-core-source.yaml
@@ -11,8 +11,8 @@ imports:
 
 namespaces:
   gks.core: /ga4gh/schema/gks-core/1.0.0-snapshot.2024-11.2/json/
-  vrs: /ga4gh/schema/vrs/2.0.0-ballot.2024-11.1/json/
-  cat-vrs: /ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.1/json/
+  vrs: /ga4gh/schema/vrs/2.0.0-ballot.2024-11.2/json/
+  cat-vrs: /ga4gh/schema/cat-vrs/1.0.0-ballot.2024-11.2/json/
 
 $defs:
   # abstract core classes section -- InformationEntity, Activity, StudyResult, Proposition

diff --git a/submodules/cat-vrs b/submodules/cat-vrs