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Create ome-zarr from hdf5 container #176

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tibuch opened this issue Sep 4, 2024 · 2 comments
Open

Create ome-zarr from hdf5 container #176

tibuch opened this issue Sep 4, 2024 · 2 comments
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@tibuch
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tibuch commented Sep 4, 2024

We have a test-dataset which contains all raw data (including metadata files) of a CV acquisition packaged into an hdf5 container. We should test if we can use this as input to our ome-zarr converter.
@tibuch tibuch self-assigned this Sep 4, 2024
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tibuch commented Sep 17, 2024

This works. See https://github.com/fmi-faim/faim-ipa/blob/b834c844d3aedb3227dcfb7c852890a2ccb35587/examples/hdf5-to-zarr/benchmark.py

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Also try to extract from zip container, and compare performance.

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