To run the fqcheck example program with read files r1.fq.gz and f2.fq.gz:
$ cargo build --example fqcheck --release
$ target/release/examples/fqcheck r1.fq.gz r2.fq.gz
input streams:
- fastq
- fasta
- TODO sam/bam
- TODO gfa
todo:
- quality score trait,
Phredalias foru8 - futures::streams for async
- GAT lending iterator
- benchmark
- examples