From 7726fc5b38c5bf002f541aae688d2e0c638d64d9 Mon Sep 17 00:00:00 2001
From: Congo <jobcongo2@gmail.com>
Date: Fri, 11 Nov 2022 12:47:26 +0100
Subject: [PATCH] update ribs #157

---
 examples/modules/csm/examples/ribs/disk.cfg   |  10 +-
 examples/modules/csm/examples/ribs/disk.json  |  64 ++-
 examples/modules/csm/pages/ribs/index.adoc    |  16 +-
 .../csm/pages/ribs/solid-information.adoc     | 505 ++++++++++++++++++
 4 files changed, 567 insertions(+), 28 deletions(-)
 create mode 100644 examples/modules/csm/pages/ribs/solid-information.adoc

diff --git a/examples/modules/csm/examples/ribs/disk.cfg b/examples/modules/csm/examples/ribs/disk.cfg
index e65fd7f6..e95d05e3 100644
--- a/examples/modules/csm/examples/ribs/disk.cfg
+++ b/examples/modules/csm/examples/ribs/disk.cfg
@@ -1,13 +1,13 @@
 
-directory=toolboxes/solid/ribs/disk2/P2
+directory=toolboxes/solid/ribs/disk2/P1
 
-case.discretization=P2 #P1,P2
+case.discretization=P1 #P1,P2
 
 [solid]
-filename=$cfgdir/disk.json
+json.filename=$cfgdir/disk.json
 
-mesh.filename=girder:{file:5b1fd71cb0e9570499f66be5}
-gmsh.partition=1
+# mesh.filename=girder:{file:5b1fd71cb0e9570499f66be5}
+# gmsh.partition=1
 
 on.type=elimination_symmetric
 
diff --git a/examples/modules/csm/examples/ribs/disk.json b/examples/modules/csm/examples/ribs/disk.json
index 89c821c0..2542b0a5 100644
--- a/examples/modules/csm/examples/ribs/disk.json
+++ b/examples/modules/csm/examples/ribs/disk.json
@@ -1,9 +1,33 @@
 {
     "Name": "Solid Mechanics ",
     "ShortName":"Solid",
+    "Metadata":
+    {
+        "version": "1",
+        "author": ["vincentchabannes","prudhomm","lberti","jobinhio"],
+        "date": "23/09/2022",
+        "references":[""]
+    },
     "Models":
     {
-	"equations":"Elasticity"
+      "solid":
+      {
+        "setup":
+        {
+          "equations":"Elasticity"
+        }
+      }  
+    },
+    "Meshes":
+    {
+        "solid":
+        {
+          "Import":
+          {
+            "filename":"girder:{file:5b1fd71cb0e9570499f66be5}",
+            "partition":"1"
+          }
+        }
     },
     // tag::materials[]
     "Materials":
@@ -19,16 +43,16 @@
     // tag::boundaryconditions[]
     "BoundaryConditions":
     {
-        "displacement":
+        "solid":
         {
-            "Dirichlet":
+            "displacement":
             {
                 "fixed":
                 {
                     "expr":"{0,0,0}"
                 }
             },
-            "Neumann_scalar":
+            "normal_stress": // Neumann_scalar
             {
                 "load":
                 {
@@ -40,22 +64,24 @@
     // end::boundaryconditions[]
     "PostProcess":
     {
-	"Exports":
-	{
-            "fields":["displacement","von-mises-criterion","tresca-criterion", "principal-stresses"]
-	},
-        "Measures":
+        "solid":
         {
-	    "VolumeVariation":"omega",
-	    "Maximum":
-	    {
-		"load":
-		{
-		    "markers":"load",
-		    "fields":["displacement"]
-		}
-	    }            
+            "Exports":
+            {
+                    "fields":["displacement","von-mises-criterion","tresca-criterion", "principal-stresses"]
+            },
+            "Measures":
+            {
+                "VolumeVariation":"omega",
+                "Maximum":
+                {
+                    "load":
+                    {
+                        "markers":"load",
+                        "fields":["displacement"]
+                    }
+                }            
+            }
         }
     }
-
 }
diff --git a/examples/modules/csm/pages/ribs/index.adoc b/examples/modules/csm/pages/ribs/index.adoc
index 894d99c8..2a775e28 100644
--- a/examples/modules/csm/pages/ribs/index.adoc
+++ b/examples/modules/csm/pages/ribs/index.adoc
@@ -1,8 +1,14 @@
 = Bracing with ribs
 :page-vtkjs: true
+:page-viewer: true
+:page-jupyter: true
 :uri-data: https://github.com/feelpp/toolbox/blob/master/examples/modules/csm/examples
 :uri-data-edit: https://github.com/feelpp/toolbox/edit/master/examples/modules/csm/examples
-
+:imagesprefix: 
+ifdef::env-github,env-browser,env-vscode[:imagesprefix: ../../assets/images/]
+:jupyter-language-name: python
+:jupyter-language-version: 3.8
+:url-ipywidgets: https://ipywidgets.readthedocs.io/en/stable/
 == Introduction
 
 The ribs have stiffening effect. So the plates are supplied with different ribs.
@@ -26,6 +32,8 @@ Copy case option to clipboard
 </button>
 ++++
 
+NOTE: The report of the execution of the command above is available xref:t-beam/solid-informations.adoc[here].
+
 == Data files
 
 The case data files are available in Github link:{uri-data}/ribs/[here]
@@ -40,7 +48,7 @@ The first step is to create the model of the plate, which we can simply do in th
 The finished geometry (Creo) and the meshed model (Gmsh):
 
 |====
-a| image:ribs/image2.png[] a| image:ribs/image4.png[]
+a| image:{imagesprefix}ribs/image2.png[] a| image:{imagesprefix}ribs/image4.png[]
 |====
 
 == Materials and boundary conditions
@@ -74,7 +82,7 @@ include::{examplesdir}/ribs/disk.json[tags=boundaryconditions]
 Maximum displacement: 0.6501 mm Maximum stress: 512.4 MPa
 
 |====
-a| image:ribs/image5.png[] a| image:ribs/image6.png[]
+a| image:{imagesprefix}ribs/image5.png[] a| image:{imagesprefix}ribs/image6.png[]
 |====
 
 .3D Model without ribs.
@@ -97,7 +105,7 @@ feelppVtkJs.createSceneImporter( vtkVisuSection1, {
 Maximum displacement: 0.528 mm Maximum stress: 599.1 MPa
 
 |====
-a| image:ribs/image7.png[] a| image:ribs/image8.png[]
+a| image:{imagesprefix}ribs/image7.png[] a| image:{imagesprefix}ribs/image8.png[]
 |====
 
 .3D Model with ribs.
diff --git a/examples/modules/csm/pages/ribs/solid-information.adoc b/examples/modules/csm/pages/ribs/solid-information.adoc
new file mode 100644
index 00000000..3aa68144
--- /dev/null
+++ b/examples/modules/csm/pages/ribs/solid-information.adoc
@@ -0,0 +1,505 @@
+:sectnums:
+= Toolbox : solid
+== Environment
+
+[cols="2"]
+|===
+<|prefix
+<|solid
+
+<|keyword
+<|solid
+
+<|root repository
+<|/home/congo/feelppdb/toolboxes/solid/ribs/disk2/P1/np_1
+
+<|number of processus
+<|1
+|===
+
+== Physics
+=== solid
+==== solid
+
+[cols="2"]
+|===
+<|modeling
+<|solid
+
+<|type
+<|solid
+
+<|name
+<|solid
+|===
+
+
+[cols="2"]
+|===
+<|Equation
+<|Elasticity
+|===
+
+
+
+
+== Physics2
+
+[cols="2"]
+|===
+<|time mode
+<|Stationary
+|===
+
+== Materials Properties
+
+[cols="2"]
+|===
+<|number of materials
+<|1
+|===
+
+=== Material : omega
+
+[cols="5",options="header"]
+|===
+<|Name
+<|Expression
+<|Symbol
+<|Shape
+<|Components
+
+<|Lame-first-parameter
+<|-(-1+2*materials_omega_nu)^(-1)*materials_omega_E*(1+materials_omega_nu)^(-1)*materials_omega_nu
+<|materials_omega_lambdaLame
+<|scalar
+<|
+
+<|Lame-second-parameter
+<|1/2*materials_omega_E*(1+materials_omega_nu)^(-1)
+<|materials_omega_muLame
+<|scalar
+<|
+
+<|Poisson-ratio
+<|0.4
+<|materials_omega_nu
+<|scalar
+<|
+
+<|Young-modulus
+<|210000.0
+<|materials_omega_E
+<|scalar
+<|
+
+<|bulk-modulus
+<|-1/3*(-1+2*materials_omega_nu)^(-1)*materials_omega_E
+<|materials_omega_K
+<|scalar
+<|
+
+<|density
+<|7.8E-6
+<|materials_omega_rho
+<|scalar
+<|
+|===
+
+
+== Boundary Conditions
+=== Displacement Imposed
+==== fixed
+
+[cols="2"]
+|===
+<|method
+<|elimination
+
+<|expr
+<|{0,0,0}
+
+<|markers
+<a|
+[cols="1"]
+!===
+<!fixed
+!===
+
+|===
+
+
+=== Normal Stress
+==== load
+
+[cols="2"]
+|===
+<|frame
+<|lagrangian
+
+<|expr
+<|1.0
+
+<|markers
+<a|
+[cols="1"]
+!===
+<!load
+!===
+
+|===
+
+
+
+== Meshes
+=== Mesh : solid
+
+[cols="2"]
+|===
+<|Discretization
+<|/Mesh/solid
+
+<|filename
+<|/home/congo/feelppdb/toolboxes/solid/ribs/disk2/P1/np_1/solid.mesh.json
+|===
+
+==== Import configuration
+
+[cols="2"]
+|===
+<|mesh-filename
+<|/home/congo/feelppdb/toolboxes/solid/ribs/disk2/P1/downloads/solid/meshes/disk2.msh
+
+<|generate-partitioning
+<|1
+
+<|number-of-partition
+<|1
+|===
+
+==== Discretization
+
+[cols="2"]
+|===
+<|dim
+<|3
+
+<|h_average
+<|8.858974e-01
+
+<|h_max
+<|1.440452e+00
+
+<|h_min
+<|3.093847e-01
+
+<|n_edges
+<|168004
+
+<|n_elements
+<|119770
+
+<|n_faces
+<|258121
+
+<|n_partition
+<|1
+
+<|n_points
+<|29648
+
+<|order
+<|1
+
+<|real_dim
+<|3
+
+<|shape
+<|Simplex_3_1_3
+|===
+
+
+
+
+== Function Spaces
+=== Displacement
+
+[cols="2"]
+|===
+<|mesh
+<|/Mesh/solid
+
+<|nSpace
+<|1
+|===
+
+==== Basis
+
+[cols="2"]
+|===
+<|is_continuous
+<|1
+
+<|nComponents
+<|3
+
+<|nComponents1
+<|3
+
+<|nComponents2
+<|1
+
+<|nLocalDof
+<|4
+
+<|name
+<|lagrange
+
+<|order
+<|1
+
+<|shape
+<|vectorial
+|===
+
+==== Dof Table
+
+[cols="2"]
+|===
+<|nDof
+<|88944
+|===
+
+
+
+
+== Fields
+=== displacement
+
+[cols="2"]
+|===
+<|base symbol
+<|s
+
+<|function space
+<|/FunctionSpace/object-0
+
+<|name
+<|displacement
+
+<|prefix symbol
+<|solid
+|===
+
+
+[cols="5",options="header"]
+|===
+<|Name
+<|Expression
+<|Symbol
+<|Shape
+<|Components
+
+<|eval of displacement
+<|idv(.)
+<|solid_s
+<|vectorial [3]
+<a|
+[cols="2",options="header"]
+!===
+<!Symbol
+<!Indices
+
+<!solid_s_0
+<!0,0
+
+<!solid_s_1
+<!1,0
+
+<!solid_s_2
+<!2,0
+!===
+
+
+<|norm2 of displacement
+<|norm2(.)
+<|solid_s_magnitude
+<|scalar
+<|
+
+<|grad of displacement
+<|gradv(.)
+<|solid_grad_s
+<|tensor2 [3x3]
+<a|
+[cols="2",options="header"]
+!===
+<!Symbol
+<!Indices
+
+<!solid_grad_s_00
+<!0,0
+
+<!solid_grad_s_01
+<!0,1
+
+<!solid_grad_s_02
+<!0,2
+
+<!solid_grad_s_10
+<!1,0
+
+<!solid_grad_s_11
+<!1,1
+
+<!solid_grad_s_12
+<!1,2
+
+<!solid_grad_s_20
+<!2,0
+
+<!solid_grad_s_21
+<!2,1
+
+<!solid_grad_s_22
+<!2,2
+!===
+
+
+<|normal derivative of displacement
+<|dnv(.)
+<|solid_dn_s
+<|vectorial [3]
+<a|
+[cols="2",options="header"]
+!===
+<!Symbol
+<!Indices
+
+<!solid_dn_s_0
+<!0,0
+
+<!solid_dn_s_1
+<!1,0
+
+<!solid_dn_s_2
+<!2,0
+!===
+
+
+<|curl of displacement
+<|curlv(.)
+<|solid_curl_s
+<|vectorial [3]
+<a|
+[cols="2",options="header"]
+!===
+<!Symbol
+<!Indices
+
+<!solid_curl_s_0
+<!0,0
+
+<!solid_curl_s_1
+<!1,0
+
+<!solid_curl_s_2
+<!2,0
+!===
+
+
+<|norm2 of curl of displacement
+<|norm2(curlv(.))
+<|solid_curl_s_magnitude
+<|scalar
+<|
+
+<|div of displacement
+<|divv(.)
+<|solid_div_s
+<|scalar
+<|
+|===
+
+
+
+== Algebraic Solver
+=== Backend
+
+[cols="2"]
+|===
+<|prefix
+<|solid
+
+<|type
+<|petsc
+|===
+
+=== KSP
+
+[cols="2"]
+|===
+<|atol
+<|1.000000e-50
+
+<|dtol
+<|1.000000e+05
+
+<|maxit
+<|1000
+
+<|reuse-prec
+<|0
+
+<|rtol
+<|1.000000e-08
+
+<|type
+<|gmres
+|===
+
+=== SNES
+
+[cols="2"]
+|===
+<|atol
+<|1.000000e-50
+
+<|maxit
+<|50
+
+<|reuse-jac
+<|0
+
+<|rtol
+<|1.000000e-08
+
+<|stol
+<|1.000000e-08
+|===
+
+=== KSP in SNES
+
+[cols="2"]
+|===
+<|maxit
+<|1000
+
+<|reuse-prec
+<|0
+
+<|rtol
+<|1.000000e-05
+|===
+
+=== PC
+
+[cols="2"]
+|===
+<|type
+<|gamg
+|===
+
+
+
+