DESCRIPTION

Type: Package
Package: qtl2pleio
Title: Testing Pleiotropy in Multiparental Populations
Version: 1.4.3.9000
Authors@R:
    person(given = "Frederick J",
           family = "Boehm",
           role = c("aut", "cre"),
           email = "frederick.boehm@gmail.com",
           comment = c(ORCID = "0000-0002-1644-5931"))
Description: We implement an
    adaptation of Jiang & Zeng's (1995) <https://www.genetics.org/content/140/3/1111> likelihood ratio test for testing
    the null hypothesis of pleiotropy against the alternative hypothesis,
    two separate quantitative trait loci. The test differs from that in Jiang & Zeng (1995) <https://www.genetics.org/content/140/3/1111> 
    and that in Tian et al. (2016) <doi:10.1534/genetics.115.183624> in
    that our test accommodates multiparental populations.
License: MIT + file LICENSE
URL: https://github.com/fboehm/qtl2pleio
BugReports: https://github.com/fboehm/qtl2pleio/issues
Depends:
    R (>= 3.2)
Imports:
    dplyr,
    gemma2,
    ggplot2,
    magrittr,
    MASS,
    Rcpp,
    rlang,
    tibble,
    parallel
Suggests:
    covr,
    mvtnorm,
    knitr,
    rmarkdown,
    testthat,
    broman,
    devtools,
    qtl2,
    parallelly
LinkingTo:
    Rcpp,
    RcppEigen
Encoding: UTF-8
Language: en-US 
LazyData: true
NeedsCompilation: yes
RoxygenNote: 7.1.1
VignetteBuilder: knitr