DESCRIPTION

Package: spicyR
Type: Package
Title: Spatial analysis of in situ cytometry data
Version: 1.11.5
Authors@R: c(person("Nicolas", "Canete", email = "nicolas.canete@sydney.edu.au",
    role = c("aut")),
    person("Ellis", "Patrick", email = "ellis.patrick@sydney.edu.au",
    role = c("aut", "cre")))
Description: spicyR provides a series of functions to aid in the analysis of both 
    immunofluorescence and mass cytometry imaging data as well as other assays that 
    can deeply phenotype individual cells and their spatial location.
License: GPL (>=2)
LazyData: true
biocViews: 
    SingleCell, CellBasedAssays, Spatial
Encoding: UTF-8
Depends: R (>= 4.1)
VignetteBuilder: knitr
BugReports: https://github.com/ellispatrick/spicyR/issues
Imports: ggplot2, concaveman, BiocParallel, spatstat.explore, spatstat.geom, 
        lmerTest, BiocGenerics, S4Vectors, lme4, methods, mgcv, pheatmap,
        rlang, grDevices, IRanges, stats, data.table, dplyr, tidyr, scam,
        SingleCellExperiment, SpatialExperiment, SummarizedExperiment, ggforce
Suggests: BiocStyle, knitr, rmarkdown, pkgdown
RoxygenNote: 7.2.3