From 339cef11ede773a4a32ecb408463f5048d1790b7 Mon Sep 17 00:00:00 2001 From: Pratik Gupte Date: Fri, 10 Nov 2023 11:45:28 +0000 Subject: [PATCH] Add news and CRAN comments --- NEWS.md | 16 ++++++++++++++++ cran-comments.md | 5 +++++ 2 files changed, 21 insertions(+) create mode 100644 NEWS.md create mode 100644 cran-comments.md diff --git a/NEWS.md b/NEWS.md new file mode 100644 index 00000000..e4f7f791 --- /dev/null +++ b/NEWS.md @@ -0,0 +1,16 @@ +# cfr 0.1.0 + +Initial CRAN submission of _cfr_, an R package to estimate the severity of a disease and ascertainment of cases while correcting for delays in outcomes of reported cases being known. + +This release includes: + +1. Functions for the overall severity of an outbreak, the overall severity of an outbreak estimated with an expanding time series of data, and the time-varying severity of an outbreak, +2. A function to estimate the number of outcomes to be expected from a given number of cases assuming a user-specified distribution of delays between cases and outcomes being known, +3. A function to estimate the overall (static) or time-varying ascertainment of cases in an outbreak by comparing the relevant severity measures against a user-specified baseline severity, +4. A data preparation generic with an S3 method for the `` class from the _incidence2_ package, +5. Example daily case and death data from the 1976 Ebola Virus Disease outbreak as reported in Camacho et al. (2014). , +6. Example daily case and death data from the Covid-19 pandemic over the range 2020-01-01 to 2022-12-31 from the 19 countries with over 100,00 deaths over this period, as taken from the _covidregionaldata_ package which is no longer on CRAN, +7. Vignettes describing how to get started with severity estimation, and more detailed workflows on different kinds of severity estimation, +8. A vignette on working with data from the _incidence2_ package, and a vignette on working with delay distributions, +9. 100% code coverage, +10. Workflows to render the vignettes and README as a website. diff --git a/cran-comments.md b/cran-comments.md new file mode 100644 index 00000000..858617db --- /dev/null +++ b/cran-comments.md @@ -0,0 +1,5 @@ +## R CMD check results + +0 errors | 0 warnings | 1 note + +* This is a new release.