Can litemol visualize the Torsional Angles in the tertiary structure of a protein?

[Inspriatio]

Now,I have dihedral angle data for a protein. Can litemol visualize it?

[dsehnal]

It would be possible to write a custom visual for it. However, we already have some code to show dihedrals in Mol* (https://molstar.org) so it should not be too difficult to adapt it to show “custom” data. Would it be feasible for you to use that?

[Inspriatio]

It would be possible to write a custom visual for it. However, we already have some code to show dihedrals in Mol* (https://molstar.org) so it should not be too difficult to adapt it to show “custom” data. Would it be feasible for you to use that?

Thank you very much for your answer, I don't know if Mol * can be run on the web side, there is no running instance on its GitHub. Can't litemol realize dihedral angle visualization?

[dsehnal]

Mol* can be run on any website same as LiteMol. The usege is very similar to that of LiteMol (it's a continuation of LiteMol and NGL projects). This is the angle visualization from it:

In LiteMol, the code would have to written extra.

[Inspriatio]

Thank you very much for your patience. Could Mol * have any examples running on the web (like the example folder in the litemol project)?

[Inspriatio]

Mol* can be run on any website same as LiteMol. The usege is very similar to that of LiteMol (it's a continuation of LiteMol and NGL projects). This is the angle visualization from it:

In LiteMol, the code would have to written extra.
Maybe I made a mistake in expression, is it possible to implement this code in my own project when implementing this dihedral angle visualization?

[dsehnal]

There is this for example https://github.com/molstar/molstar/tree/master/src/apps/basic-wrapper or https://github.com/molstar/molstar/tree/master/src/examples/proteopedia-wrapper

[Inspriatio]

Excuse me, how is the custom visualization dihedral angle in mol * calculated, such as the angle between N-Cα and Cα-C, I calculated it with the help of mathematical surface angle. The results visualized above are not the same as mol *. Thank you in advance.

[dsehnal]

It's not the same because I did not select N-Ca/Ca-C, but some "random" 4 atoms. I just wanted to show the visuals for the dihedral angle itself.