calculate_z_scores_script

cancer_type=`cat $WORKDIR/cancer_type`
grep $cancer_type $vini_dir/database/cross_references > $WORKDIR/tmp
tissue=`cat $WORKDIR/tmp | awk '{print $2}'`
rm $WORKDIR/tmp 

source $INSTALL/miniconda3/bin/activate
conda activate env310

python batch_calculate_gene_expressions.py -g $vini_dir/genes/Uniprot_ID_list -t $tissue -o ./genes/expression_scores.csv -n ${SLURM_NTASKS}

conda deactivate