diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml index f285e55..62bb0df 100644 --- a/.github/workflows/docs.yml +++ b/.github/workflows/docs.yml @@ -1,13 +1,10 @@ name: docs/gh-pages -on: - create: - tags: - - v* +on: [workflow_dispatch] jobs: build-docs: name: Build docs and push to gh-pages - runs-on: ubuntu-18.04 + runs-on: ubuntu-latest steps: - name: Checkout branch uses: actions/checkout@v2 @@ -18,16 +15,19 @@ jobs: python-version: 3.8 - name: Install poetry - uses: snok/install-poetry@v1.1.1 - + uses: snok/install-poetry@v1 + with: + virtualenvs-create: true + - name: Install dependencies - run: poetry install + run: poetry install --no-interaction - name: Install pandoc run: sudo apt-get install pandoc - name: build docs run: | + source $(poetry env info --path)/activate cd docs make clean make tutorials @@ -35,9 +35,10 @@ jobs: cd .. - name: deploy to gh-pages - uses: Cecilapp/GitHub-Pages-deploy@master + uses: Cecilapp/GitHub-Pages-deploy@v3 env: - EMAIL: dhagan@mit.edu - GH_TOKEN: ${{ secrets.ACCESS_TOKEN }} - BUILD_DIR: docs/_build/html + GITHUB_TOKEN: ${{secrets.GITHUB_TOKEN}} + with: + email: david.hagan@quant-aq.com + build_dir: docs/_build/html diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 626490b..03f3a66 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -1,13 +1,12 @@ name: build & release on: - create: - tags: - - v* + release: + types: [published] jobs: build-n-publish: name: Build and publish to PyPI - runs-on: ubuntu-18.04 + runs-on: ubuntu-20.04 steps: - name: Checkout branch uses: actions/checkout@v2 @@ -18,19 +17,21 @@ jobs: python-version: 3.8 - name: Install poetry - uses: snok/install-poetry@v1.1.1 + uses: snok/install-poetry@v1 + with: + virtualenvs-create: true - name: Install dependencies - run: poetry install + run: poetry install --no-interaction - name: Build and publish to PyPI run: | poetry build - poetry publish -u ${{ secrets.PYPI_USERNAME }} -p ${{ secrets.PYPI_PASSWORD }} + poetry publish -u __token__ -p ${{ secrets.PYPI_TOKEN }} publish-to-docker: name: Build Docker image and push to DockerHub - runs-on: ubuntu-18.04 + runs-on: ubuntu-20.04 steps: - name: Checkout branch uses: actions/checkout@v2 diff --git a/.github/workflows/test-and-verify.yml b/.github/workflows/test-and-verify.yml index 5de06a1..da2f5af 100644 --- a/.github/workflows/test-and-verify.yml +++ b/.github/workflows/test-and-verify.yml @@ -5,7 +5,7 @@ jobs: runs-on: ubuntu-latest strategy: matrix: - python: [3.6, 3.7, 3.8] + python: ["3.8", "3.9", "3.10", "3.11"] name: Python ${{ matrix.python }} tests steps: - name: Checkout branch @@ -17,14 +17,16 @@ jobs: python-version: ${{ matrix.python }} - name: Install poetry - uses: snok/install-poetry@v1.1.1 + uses: snok/install-poetry@v1 + with: + virtualenvs-create: true - name: Install dependencies - run: poetry install + run: poetry install --no-interaction - name: Run tests and generate coverage report run: | - poetry run pytest --cov=./ --cov-report=xml + poetry run pytest tests/ --cov=./ --cov-report=xml - name: Upload coverage to Codecov uses: codecov/codecov-action@v1 diff --git a/opcsim/__init__.py b/opcsim/__init__.py index 0f43e57..352c581 100644 --- a/opcsim/__init__.py +++ b/opcsim/__init__.py @@ -1,4 +1,4 @@ -from pkg_resources import get_distribution +from importlib.metadata import version import warnings import pandas as pd @@ -16,4 +16,4 @@ set() -__version__ = get_distribution("opcsim").version \ No newline at end of file +__version__ = version("opcsim") \ No newline at end of file diff --git a/opcsim/metrics.py b/opcsim/metrics.py index 084d93a..1a3a94d 100644 --- a/opcsim/metrics.py +++ b/opcsim/metrics.py @@ -33,7 +33,7 @@ def compute_bin_assessment(opc, refr, kappa, rh_values=[0., 35., 95.]): assert(isinstance(opc, OPC)), "opc must be an instance of the opcsim.OPC class" # init the dataframe to hold our results - rv = pd.DataFrame() + rv = list() for rh in rh_values: for 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Hagan ", "Jesse H Kroll "] +authors = ["David H Hagan ", "Jesse H Kroll "] maintainers = ["David H Hagan "] readme = "README.md" homepage = "https://dhhagan.github.io/opcsim/" @@ -15,21 +15,21 @@ packages = [ ] [tool.poetry.dependencies] -python = "^3.6.1" -pandas = "^1.0.3" -seaborn = "^0.10.1" -numpy = "^1.18.4" -scipy = "^1.4.1" -matplotlib = "^3.2.1" +python = ">=3.8,<3.12" +pandas = ">=1.2" +seaborn = ">=0.12" +numpy = ">=1.20,<1.24.0 || >1.24.0" +scipy = ">=1.7" +matplotlib = ">=3.4,<3.6.1 || >=3.6.1" -[tool.poetry.dev-dependencies] -pytest = "^3.4" -pytest-cov = "^2.9.0" -jupyter = "^1.0.0" -sphinx = "^3.0.3" -pandoc = "^1.0.2" -sphinx-bootstrap-theme = "^0.7.1" -numpydoc = "^0.9.2" [tool.poetry.urls] -"Bug Tracker" = "https://github.com/dhhagan/opcsim/issues" \ No newline at end of file +"Bug Tracker" = "https://github.com/dhhagan/opcsim/issues" +[tool.poetry.group.dev.dependencies] +pandoc = "^2.4" +sphinx-bootstrap-theme = "^0.8.1" +pytest = "^8.1.1" +pytest-cov = "^5.0.0" 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