diff --git a/Dockerfile b/Dockerfile
index 57a89d4..9dfed68 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,6 +1,6 @@
# syntax=docker/dockerfile:1
# Prepare the base environment.
-FROM python:3.12.6-alpine AS builder_base
+FROM python:3.12.8-alpine AS builder_base
LABEL org.opencontainers.image.authors=asi@dbca.wa.gov.au
LABEL org.opencontainers.image.source=https://github.com/dbca-wa/penguins
@@ -26,11 +26,11 @@ RUN apk add --no-cache \
proj \
binutils \
&& ln -s /usr/lib/libproj.so.25 /usr/lib/libproj.so \
- && ln -s /usr/lib/libgdal.so.35 /usr/lib/libgdal.so \
+ && ln -s /usr/lib/libgdal.so.36 /usr/lib/libgdal.so \
&& ln -s /usr/lib/libgeos_c.so.1 /usr/lib/libgeos_c.so
WORKDIR /app
COPY poetry.lock pyproject.toml ./
-ARG POETRY_VERSION=1.8.3
+ARG POETRY_VERSION=1.8.5
RUN pip install --no-cache-dir --root-user-action=ignore poetry==${POETRY_VERSION} \
&& poetry config virtualenvs.create false \
&& poetry install --no-interaction --no-ansi --only main
diff --git a/kustomize/README.md b/kustomize/README.md
index 7d57a95..b5b61df 100644
--- a/kustomize/README.md
+++ b/kustomize/README.md
@@ -2,7 +2,7 @@
Declarative management of Penguins Observations System objects using Kustomize.
-# How to use
+## How to use
Within an overlay directory, create a `.env` file to contain required secret
values in the format KEY=value (i.e. `overlays/uat/.env`).
@@ -19,8 +19,8 @@ Run `kubectl` with the `-k` flag to generate resources for a given overlay:
kubectl apply -k kustomize/overlays/uat --namespace penguins --dry-run=client
```
-# References:
+## References
-* https://kubernetes.io/docs/tasks/manage-kubernetes-objects/kustomization/
-* https://github.com/kubernetes-sigs/kustomize
-* https://github.com/kubernetes-sigs/kustomize/tree/master/examples
+-
+-
+-
diff --git a/poetry.lock b/poetry.lock
index 28b5ce0..a221d0a 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -16,31 +16,28 @@ tests = ["mypy (>=0.800)", "pytest", "pytest-asyncio"]
[[package]]
name = "asttokens"
-version = "2.4.1"
+version = "3.0.0"
description = "Annotate AST trees with source code positions"
optional = false
-python-versions = "*"
+python-versions = ">=3.8"
files = [
- {file = "asttokens-2.4.1-py2.py3-none-any.whl", hash = "sha256:051ed49c3dcae8913ea7cd08e46a606dba30b79993209636c4875bc1d637bc24"},
- {file = "asttokens-2.4.1.tar.gz", hash = "sha256:b03869718ba9a6eb027e134bfdf69f38a236d681c83c160d510768af11254ba0"},
+ {file = "asttokens-3.0.0-py3-none-any.whl", hash = "sha256:e3078351a059199dd5138cb1c706e6430c05eff2ff136af5eb4790f9d28932e2"},
+ {file = "asttokens-3.0.0.tar.gz", hash = "sha256:0dcd8baa8d62b0c1d118b399b2ddba3c4aff271d0d7a9e0d4c1681c79035bbc7"},
]
-[package.dependencies]
-six = ">=1.12.0"
-
[package.extras]
-astroid = ["astroid (>=1,<2)", "astroid (>=2,<4)"]
-test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"]
+astroid = ["astroid (>=2,<4)"]
+test = ["astroid (>=2,<4)", "pytest", "pytest-cov", "pytest-xdist"]
[[package]]
name = "azure-core"
-version = "1.30.2"
+version = "1.32.0"
description = "Microsoft Azure Core Library for Python"
optional = false
python-versions = ">=3.8"
files = [
- {file = "azure-core-1.30.2.tar.gz", hash = "sha256:a14dc210efcd608821aa472d9fb8e8d035d29b68993819147bc290a8ac224472"},
- {file = "azure_core-1.30.2-py3-none-any.whl", hash = "sha256:cf019c1ca832e96274ae85abd3d9f752397194d9fea3b41487290562ac8abe4a"},
+ {file = "azure_core-1.32.0-py3-none-any.whl", hash = "sha256:eac191a0efb23bfa83fddf321b27b122b4ec847befa3091fa736a5c32c50d7b4"},
+ {file = "azure_core-1.32.0.tar.gz", hash = "sha256:22b3c35d6b2dae14990f6c1be2912bf23ffe50b220e708a28ab1bb92b1c730e5"},
]
[package.dependencies]
@@ -53,23 +50,23 @@ aio = ["aiohttp (>=3.0)"]
[[package]]
name = "azure-storage-blob"
-version = "12.22.0"
+version = "12.24.0"
description = "Microsoft Azure Blob Storage Client Library for Python"
optional = false
python-versions = ">=3.8"
files = [
- {file = "azure-storage-blob-12.22.0.tar.gz", hash = "sha256:b3804bb4fe8ab1c32771fa464053da772a682c2737b19da438a3f4e5e3b3736e"},
- {file = "azure_storage_blob-12.22.0-py3-none-any.whl", hash = "sha256:bb7d2d824ce3f11f14a27ee7d9281289f7e072ac8311c52e3652672455b7d5e8"},
+ {file = "azure_storage_blob-12.24.0-py3-none-any.whl", hash = "sha256:4f0bb4592ea79a2d986063696514c781c9e62be240f09f6397986e01755bc071"},
+ {file = "azure_storage_blob-12.24.0.tar.gz", hash = "sha256:eaaaa1507c8c363d6e1d1342bd549938fdf1adec9b1ada8658c8f5bf3aea844e"},
]
[package.dependencies]
-azure-core = ">=1.28.0"
+azure-core = ">=1.30.0"
cryptography = ">=2.1.4"
isodate = ">=0.6.1"
typing-extensions = ">=4.6.0"
[package.extras]
-aio = ["azure-core[aio] (>=1.28.0)"]
+aio = ["azure-core[aio] (>=1.30.0)"]
[[package]]
name = "brotli"
@@ -176,78 +173,78 @@ files = [
[[package]]
name = "cffi"
-version = "1.17.0"
+version = "1.17.1"
description = "Foreign Function Interface for Python calling C code."
optional = false
python-versions = ">=3.8"
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optional = false
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+ {file = "isodate-0.7.2.tar.gz", hash = "sha256:4cd1aa0f43ca76f4a6c6c0292a85f40b35ec2e43e315b59f06e6d32171a953e6"},
]
-[package.dependencies]
-six = "*"
-
[[package]]
name = "jedi"
-version = "0.19.1"
+version = "0.19.2"
description = "An autocompletion tool for Python that can be used for text editors."
optional = false
python-versions = ">=3.6"
files = [
- {file = "jedi-0.19.1-py2.py3-none-any.whl", hash = "sha256:e983c654fe5c02867aef4cdfce5a2fbb4a50adc0af145f70504238f18ef5e7e0"},
- {file = "jedi-0.19.1.tar.gz", hash = "sha256:cf0496f3651bc65d7174ac1b7d043eff454892c708a87d1b683e57b569927ffd"},
+ {file = "jedi-0.19.2-py2.py3-none-any.whl", hash = "sha256:a8ef22bde8490f57fe5c7681a3c83cb58874daf72b4784de3cce5b6ef6edb5b9"},
+ {file = "jedi-0.19.2.tar.gz", hash = "sha256:4770dc3de41bde3966b02eb84fbcf557fb33cce26ad23da12c742fb50ecb11f0"},
]
[package.dependencies]
-parso = ">=0.8.3,<0.9.0"
+parso = ">=0.8.4,<0.9.0"
[package.extras]
docs = ["Jinja2 (==2.11.3)", "MarkupSafe (==1.1.1)", "Pygments (==2.8.1)", "alabaster (==0.7.12)", "babel (==2.9.1)", "chardet (==4.0.0)", "commonmark (==0.8.1)", "docutils (==0.17.1)", "future (==0.18.2)", "idna (==2.10)", "imagesize (==1.2.0)", "mock (==1.0.1)", "packaging (==20.9)", "pyparsing (==2.4.7)", "pytz (==2021.1)", "readthedocs-sphinx-ext (==2.1.4)", "recommonmark (==0.5.0)", "requests (==2.25.1)", "six (==1.15.0)", "snowballstemmer (==2.1.0)", "sphinx (==1.8.5)", "sphinx-rtd-theme (==0.4.3)", "sphinxcontrib-serializinghtml (==1.1.4)", "sphinxcontrib-websupport (==1.2.4)", "urllib3 (==1.26.4)"]
qa = ["flake8 (==5.0.4)", "mypy (==0.971)", "types-setuptools (==67.2.0.1)"]
-testing = ["Django", "attrs", "colorama", "docopt", "pytest (<7.0.0)"]
+testing = ["Django", "attrs", "colorama", "docopt", "pytest (<9.0.0)"]
[[package]]
name = "matplotlib-inline"
@@ -730,13 +744,13 @@ files = [
[[package]]
name = "packaging"
-version = "24.1"
+version = "24.2"
description = "Core utilities for Python packages"
optional = false
python-versions = ">=3.8"
files = [
- {file = "packaging-24.1-py3-none-any.whl", hash = "sha256:5b8f2217dbdbd2f7f384c41c628544e6d52f2d0f53c6d0c3ea61aa5d1d7ff124"},
- {file = "packaging-24.1.tar.gz", hash = "sha256:026ed72c8ed3fcce5bf8950572258698927fd1dbda10a5e981cdf0ac37f4f002"},
+ {file = "packaging-24.2-py3-none-any.whl", hash = "sha256:09abb1bccd265c01f4a3aa3f7a7db064b36514d2cba19a2f694fe6150451a759"},
+ {file = "packaging-24.2.tar.gz", hash = "sha256:c228a6dc5e932d346bc5739379109d49e8853dd8223571c7c5b55260edc0b97f"},
]
[[package]]
@@ -770,19 +784,19 @@ ptyprocess = ">=0.5"
[[package]]
name = "platformdirs"
-version = "4.2.2"
+version = "4.3.6"
description = "A small Python package for determining appropriate platform-specific dirs, e.g. a `user data dir`."
optional = false
python-versions = ">=3.8"
files = [
- {file = "platformdirs-4.2.2-py3-none-any.whl", hash = "sha256:2d7a1657e36a80ea911db832a8a6ece5ee53d8de21edd5cc5879af6530b1bfee"},
- {file = "platformdirs-4.2.2.tar.gz", hash = "sha256:38b7b51f512eed9e84a22788b4bce1de17c0adb134d6becb09836e37d8654cd3"},
+ {file = "platformdirs-4.3.6-py3-none-any.whl", hash = "sha256:73e575e1408ab8103900836b97580d5307456908a03e92031bab39e4554cc3fb"},
+ {file = "platformdirs-4.3.6.tar.gz", hash = "sha256:357fb2acbc885b0419afd3ce3ed34564c13c9b95c89360cd9563f73aa5e2b907"},
]
[package.extras]
-docs = ["furo (>=2023.9.10)", "proselint (>=0.13)", "sphinx (>=7.2.6)", "sphinx-autodoc-typehints (>=1.25.2)"]
-test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.4.3)", "pytest-cov (>=4.1)", "pytest-mock (>=3.12)"]
-type = ["mypy (>=1.8)"]
+docs = ["furo (>=2024.8.6)", "proselint (>=0.14)", "sphinx (>=8.0.2)", "sphinx-autodoc-typehints (>=2.4)"]
+test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=8.3.2)", "pytest-cov (>=5)", "pytest-mock (>=3.14)"]
+type = ["mypy (>=1.11.2)"]
[[package]]
name = "pre-commit"
@@ -804,13 +818,13 @@ virtualenv = ">=20.10.0"
[[package]]
name = "prompt-toolkit"
-version = "3.0.47"
+version = "3.0.48"
description = "Library for building powerful interactive command lines in Python"
optional = false
python-versions = ">=3.7.0"
files = [
- {file = "prompt_toolkit-3.0.47-py3-none-any.whl", hash = "sha256:0d7bfa67001d5e39d02c224b663abc33687405033a8c422d0d675a5a13361d10"},
- {file = "prompt_toolkit-3.0.47.tar.gz", hash = "sha256:1e1b29cb58080b1e69f207c893a1a7bf16d127a5c30c9d17a25a5d77792e5360"},
+ {file = "prompt_toolkit-3.0.48-py3-none-any.whl", hash = "sha256:f49a827f90062e411f1ce1f854f2aedb3c23353244f8108b89283587397ac10e"},
+ {file = "prompt_toolkit-3.0.48.tar.gz", hash = "sha256:d6623ab0477a80df74e646bdbc93621143f5caf104206aa29294d53de1a03d90"},
]
[package.dependencies]
@@ -916,17 +930,17 @@ files = [
[[package]]
name = "psycopg-pool"
-version = "3.2.2"
+version = "3.2.4"
description = "Connection Pool for Psycopg"
optional = false
python-versions = ">=3.8"
files = [
- {file = "psycopg_pool-3.2.2-py3-none-any.whl", hash = "sha256:273081d0fbfaced4f35e69200c89cb8fbddfe277c38cc86c235b90a2ec2c8153"},
- {file = "psycopg_pool-3.2.2.tar.gz", hash = "sha256:9e22c370045f6d7f2666a5ad1b0caf345f9f1912195b0b25d0d3bcc4f3a7389c"},
+ {file = "psycopg_pool-3.2.4-py3-none-any.whl", hash = "sha256:f6a22cff0f21f06d72fb2f5cb48c618946777c49385358e0c88d062c59cbd224"},
+ {file = "psycopg_pool-3.2.4.tar.gz", hash = "sha256:61774b5bbf23e8d22bedc7504707135aaf744679f8ef9b3fe29942920746a6ed"},
]
[package.dependencies]
-typing-extensions = ">=4.4"
+typing-extensions = ">=4.6"
[[package]]
name = "ptyprocess"
@@ -1077,24 +1091,24 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"]
[[package]]
name = "six"
-version = "1.16.0"
+version = "1.17.0"
description = "Python 2 and 3 compatibility utilities"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
+python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
files = [
- {file = "six-1.16.0-py2.py3-none-any.whl", hash = "sha256:8abb2f1d86890a2dfb989f9a77cfcfd3e47c2a354b01111771326f8aa26e0254"},
- {file = "six-1.16.0.tar.gz", hash = "sha256:1e61c37477a1626458e36f7b1d82aa5c9b094fa4802892072e49de9c60c4c926"},
+ {file = "six-1.17.0-py2.py3-none-any.whl", hash = "sha256:4721f391ed90541fddacab5acf947aa0d3dc7d27b2e1e8eda2be8970586c3274"},
+ {file = "six-1.17.0.tar.gz", hash = "sha256:ff70335d468e7eb6ec65b95b99d3a2836546063f63acc5171de367e834932a81"},
]
[[package]]
name = "sqlparse"
-version = "0.5.1"
+version = "0.5.2"
description = "A non-validating SQL parser."
optional = false
python-versions = ">=3.8"
files = [
- {file = "sqlparse-0.5.1-py3-none-any.whl", hash = "sha256:773dcbf9a5ab44a090f3441e2180efe2560220203dc2f8c0b0fa141e18b505e4"},
- {file = "sqlparse-0.5.1.tar.gz", hash = "sha256:bb6b4df465655ef332548e24f08e205afc81b9ab86cb1c45657a7ff173a3a00e"},
+ {file = "sqlparse-0.5.2-py3-none-any.whl", hash = "sha256:e99bc85c78160918c3e1d9230834ab8d80fc06c59d03f8db2618f65f65dda55e"},
+ {file = "sqlparse-0.5.2.tar.gz", hash = "sha256:9e37b35e16d1cc652a2545f0997c1deb23ea28fa1f3eefe609eee3063c3b105f"},
]
[package.extras]
@@ -1148,24 +1162,24 @@ files = [
[[package]]
name = "tzdata"
-version = "2024.1"
+version = "2024.2"
description = "Provider of IANA time zone data"
optional = false
python-versions = ">=2"
files = [
- {file = "tzdata-2024.1-py2.py3-none-any.whl", hash = "sha256:9068bc196136463f5245e51efda838afa15aaeca9903f49050dfa2679db4d252"},
- {file = "tzdata-2024.1.tar.gz", hash = "sha256:2674120f8d891909751c38abcdfd386ac0a5a1127954fbc332af6b5ceae07efd"},
+ {file = "tzdata-2024.2-py2.py3-none-any.whl", hash = "sha256:a48093786cdcde33cad18c2555e8532f34422074448fbc874186f0abd79565cd"},
+ {file = "tzdata-2024.2.tar.gz", hash = "sha256:7d85cc416e9382e69095b7bdf4afd9e3880418a2413feec7069d533d6b4e31cc"},
]
[[package]]
name = "urllib3"
-version = "2.2.2"
+version = "2.2.3"
description = "HTTP library with thread-safe connection pooling, file post, and more."
optional = false
python-versions = ">=3.8"
files = [
- {file = "urllib3-2.2.2-py3-none-any.whl", hash = "sha256:a448b2f64d686155468037e1ace9f2d2199776e17f0a46610480d311f73e3472"},
- {file = "urllib3-2.2.2.tar.gz", hash = "sha256:dd505485549a7a552833da5e6063639d0d177c04f23bc3864e41e5dc5f612168"},
+ {file = "urllib3-2.2.3-py3-none-any.whl", hash = "sha256:ca899ca043dcb1bafa3e262d73aa25c465bfb49e0bd9dd5d59f1d0acba2f8fac"},
+ {file = "urllib3-2.2.3.tar.gz", hash = "sha256:e7d814a81dad81e6caf2ec9fdedb284ecc9c73076b62654547cc64ccdcae26e9"},
]
[package.extras]
@@ -1176,13 +1190,13 @@ zstd = ["zstandard (>=0.18.0)"]
[[package]]
name = "virtualenv"
-version = "20.26.3"
+version = "20.28.0"
description = "Virtual Python Environment builder"
optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
files = [
- {file = "virtualenv-20.26.3-py3-none-any.whl", hash = "sha256:8cc4a31139e796e9a7de2cd5cf2489de1217193116a8fd42328f1bd65f434589"},
- {file = "virtualenv-20.26.3.tar.gz", hash = "sha256:4c43a2a236279d9ea36a0d76f98d84bd6ca94ac4e0f4a3b9d46d05e10fea542a"},
+ {file = "virtualenv-20.28.0-py3-none-any.whl", hash = "sha256:23eae1b4516ecd610481eda647f3a7c09aea295055337331bb4e6892ecce47b0"},
+ {file = "virtualenv-20.28.0.tar.gz", hash = "sha256:2c9c3262bb8e7b87ea801d715fae4495e6032450c71d2309be9550e7364049aa"},
]
[package.dependencies]
@@ -1249,4 +1263,4 @@ files = [
[metadata]
lock-version = "2.0"
python-versions = "~3.12"
-content-hash = "75d73ba0932b7b623b43d10de00b1112bb4d05c2949a8c5e2f9f9cf75d8047ef"
+content-hash = "6a7b95106c66ef225d277282702d714eccbfce2937513f0c072dc3660a549f05"
diff --git a/pyproject.toml b/pyproject.toml
index 367dc50..8292970 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -8,7 +8,7 @@ readme = "README.md"
[tool.poetry.dependencies]
python = "~3.12"
-django = "4.2.16"
+django = "4.2.17"
psycopg = { version = "3.2.3", extras = ["binary", "pool"] }
dbca-utils = "2.0.2"
python-dotenv = "1.0.1"
@@ -22,7 +22,7 @@ django-map-widgets = "0.5.1"
xlsxwriter = "3.2.0"
[tool.poetry.group.dev.dependencies]
-ipython = "^8.29.0"
+ipython = "^8.30.0"
ipdb = "^0.13.11"
pre-commit = "^4.0.1"