diff --git a/.github/workflows/count-git-contributions.yml b/.github/workflows/count-git-contributions.yml
deleted file mode 100644
index cb3009b63d..0000000000
--- a/.github/workflows/count-git-contributions.yml
+++ /dev/null
@@ -1,137 +0,0 @@
-name: cronjob for counting git contributions and filing a PR with results
-
-# Run every Monday at 8:00 UTC
-# On Monday, we count git contributions
-# But we can also manually trigger this
-on:
-  schedule:
-    - cron: "0 14 * * MON"
-  workflow_dispatch:
-permissions:
-  pull-requests: write
-jobs:
-  file-count-contributions-pr:
-    # The type of runner that the job will run on
-    runs-on: ubuntu-latest
-    container:
-      image: rocker/tidyverse:4.4
-
-    # We want to count the contributions to the dev branch
-    steps:
-      - name: Checkout code
-        uses: actions/checkout@v4
-        with:
-          ref: "dev"
-          fetch-depth: 0
-
-      - name: Configure git
-        run: |
-          git config --global --add safe.directory "$GITHUB_WORKSPACE"
-          git config --local user.email "actions@github.com"
-          git config --local user.name "GitHub Actions"
-
-      # We need this package for one of the notebooks run via the shell script below
-      - name: Install yaml R package
-        run: Rscript -e "install.packages('yaml')"
-
-      # Rerun the module we want new results for
-      - name: Rerun count-contributions module
-        run: |
-          bash analyses/count-contributions/run-count-contributions.sh
-
-      # Upload the manuscript YAML as an artifact
-      - name: Upload metadata YAML artifact
-        uses: actions/upload-artifact@v4
-        with:
-          name: manuscript_metadata
-          path: analyses/count-contributions/results/metadata.yaml
-
-      # Upload the author information as an artifact
-      - name: Upload author information TSV artifact
-        uses: actions/upload-artifact@v4
-        with:
-          name: author_information
-          path: analyses/count-contributions/author_information.tsv
-
-      # Create a pull request with the updated results
-      - name: Create PR with updated contribution module
-        uses: peter-evans/create-pull-request@v6
-        with:
-          token: ${{ secrets.GH_TOKEN }}
-          commit-message: Rerun count-contributions analysis module
-          signoff: false
-          branch: auto_count_contributions
-          delete-branch: true
-          title: 'GHA: Updated git contribution stats'
-          body: |
-            ### Description
-
-            This PR auto-generated from GitHub Actions rerunning `analyses/count-contributions`
- 
-            ### Instruction for reviewers
-
-            Review the updates in `analyses/count-contributions/results/` for accuracy
-          reviewers: $GITHUB_ACTOR
-
-  file-metadata-yaml-pr:
-    # The type of runner that the job will run on
-    runs-on: ubuntu-latest
-    needs: file-count-contributions-pr
-
-    # We want to add the updated metadata to the manuscript repo
-    steps:
-      - name: Checkout manuscript repository
-        uses: actions/checkout@v4
-        with:
-          repository: d3b-center/OpenPedCan-manuscript
-      
-      - name: Configure git
-        run: |
-          git config --global --add safe.directory "$GITHUB_WORKSPACE"
-          git config --local user.email "actions@github.com"
-          git config --local user.name "GitHub Actions"
-
-      # Set up directories to be able to receive artifacts
-      # Note, You can not overwrite an existing file with an artifact,
-      #  so this step also removes existing files.
-      - name: Directory setup
-        run: |
-          mkdir -p submission_info/
-          rm -f submission_info/author_information.tsv
-          rm content/metadata.yaml
-
-      - name: Download the metadata artifact
-        uses: actions/download-artifact@v3
-        with:
-          name: manuscript_metadata
-          path: content
-
-
-      - name: Download the author information artifact
-        uses: actions/download-artifact@v3
-        with:
-          name: author_information
-          path: submission_info
-
-
-      # Create a pull request with the updated results
-      - name: Create PR with updated manuscript metadata YAML
-        uses: peter-evans/create-pull-request@v6
-        with:
-          token: ${{ secrets.GH_TOKEN }}
-          commit-message: Update manuscript metadata
-          signoff: false
-          branch: auto_author_order
-          delete-branch: true
-          title: 'GHA: Updated author order'
-          body: |
-            ### Description
-
-            This PR auto-generated from GitHub Actions workflow that counts git contributions and sets author order accordingly in the `AlexsLemonade/OpenPBTA-analysis` repo.
-            See [the relevant module](https://github.com/d3b-center/OpenPedCan-analysis/tree/dev/analyses/count-contributions) for more info.
- 
-            ### Instruction for reviewers
-
-            Review the updates in `content/metadata.yaml` and `submission_info/author_information.tsv` for accuracy.
-
-          reviewers: $GITHUB_ACTOR